| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1489 |
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| Symbol | |
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| ID | 5538964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1904023 |
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| End bp | 1905210 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640893627 |
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| Product | glycosyl transferase group 1 |
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| Protein accession | YP_001431601 |
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| Protein GI | 156741472 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.113053 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.618426 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGATTC TCTACATCGC AAGCGGCATT CCTGTTCCCG GCACGCTTGG CGGCTCAATC
CATACGTTTG AAGTCGCGCG CGGGCTTGCG CGGCGCGGGC ACGTGGTCGA TATCGTCGCT
GCATCTCAAC CCGGCGTGTT CGAGATTGCA TCGCTGGCGC GCCCGGTGTC GTCTCGTCTC
GATTATGGGC GTCTGCACCA CGTCGATATT CCCAAGACTC TGAGCCTTCT CGCCGCTCCG
GTGATCATGC GATTAGCGCG ATCCCTGAAA CCTGATGTCA TTATGGAGCG GTACTATAAT
TTCGCCGGAG CAGGCATCCT TGCCGCTCGA CGCCTGGGCA TCCCTTCGAT CCTCGAAGTC
AACGCGCTGA TCGTCGATCC GCCGACAGTG CTGAAACGAC GCCTCGATGA TATGCTCGGC
GGTCCCATGC GCCGCTGGGC AGTGGCGCAG TGCCGCTTCG CAGATCGGAT TGTGACGCCA
TTGCACACAA CCGTTCCGCC CGACATTCCG CGCACCAGGA TTGTTGAGTT GCCATGGGGC
GCCAATGTGG AACATTTCTC TCTTGACCGA CGAGCCGCCA GTACTGCGCC GATGCAGCCA
ACCGTCGTGT TTCTCGGCTC ATTCCGCGCC TGGCACGGCG TGCTCGATGC GGTGCGCGCC
GGCGGACTGC TCGTGGAGCA AGGGCGCGTA TGTCGTTTCC TGTTTATTGG CGATGGTCCG
CAACGCGCTA TCGCAGAACG ATTGTCGGCG CACTGGGGCG AACAGTTCAC TTTTACCGGC
GCTGTACCAT ACGATGACGT CCCTTCGCTG CTGGCGCAGG CGTCGGTTGC GGTTGCGCCA
TTCAACACGG CAGCCCATCC TGCGCTCCGC GCTGCTGGAT TCTTCTGGTC GCCGTTGAAA
GTGTTCGAGT ATATGGCTGC GGCGCTCCCG GTTGTGACGA TCAACCTTCC ACCGCTCAAC
CAGATCGTGC GCCACGGCAT CGAGGGGTTG CTCTATCCCG AAGGTGATAC CGGTGCACTG
GCGGCAGCAA TTGCCTACCT GCTCGACCAC CCCGACGAAG CGCGCGCAAT GGGCGCCCGC
GGGCGCGAGC GCGTCATGAT GCACTTCTCG TGGGCGCGGC ACTGCGAGCA ACTGGAACGT
GTTATGAGAG AGATTGTGGA AGAGCGTTGC CCGTCGCACA TCGTATAA
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| Protein sequence | MKILYIASGI PVPGTLGGSI HTFEVARGLA RRGHVVDIVA ASQPGVFEIA SLARPVSSRL
DYGRLHHVDI PKTLSLLAAP VIMRLARSLK PDVIMERYYN FAGAGILAAR RLGIPSILEV
NALIVDPPTV LKRRLDDMLG GPMRRWAVAQ CRFADRIVTP LHTTVPPDIP RTRIVELPWG
ANVEHFSLDR RAASTAPMQP TVVFLGSFRA WHGVLDAVRA GGLLVEQGRV CRFLFIGDGP
QRAIAERLSA HWGEQFTFTG AVPYDDVPSL LAQASVAVAP FNTAAHPALR AAGFFWSPLK
VFEYMAAALP VVTINLPPLN QIVRHGIEGL LYPEGDTGAL AAAIAYLLDH PDEARAMGAR
GRERVMMHFS WARHCEQLER VMREIVEERC PSHIV
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