| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1488 |
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| Symbol | |
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| ID | 5538963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1902527 |
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| End bp | 1903810 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640893626 |
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| Product | glycosyl transferase group 1 |
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| Protein accession | YP_001431600 |
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| Protein GI | 156741471 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0380983 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.669661 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACATCC TGCTTCCAAC CGACGTTTTC CCCCCCGGCT GCGGCGGTGC AGGCTGGAGC
GCACACGCGC TGGCGCTGGC GTTGATCACG CGCGGTCACA CCGTGACTGC CATTGTCCCG
CGCGAAGGAG ACCGTGGACT TGTCACCGGC GAAACGCGCG GCGTACCGAC GGTTTCTTTC
GGTTATCGCG CGCCGCGCAT CCCCTTCGTG CGCAACTACG CGCGCAACGA GCGGTTGTGG
CCCCGCCTGG CGCGGGTGAT GGTCGAAGCC AGCGCAACAC ACACGTCACA TCATCCGGCA
ATGATCATTC ATGCCCAACA CGTTCAGGTT GCGCCTGCCG CTGTGATGGC CGGGCAGCGG
CTTGGCGCAC CGGTGGTCAT CAGTGTGCGC GATCACTGGC CCTGGGATTA TTTTGCAACC
GGGTTGCACG GCGACCGCAT CCCCCATCCC CGTCAGACAT GGGCGTCGCT GGCAGCCGAT
CTGCCCGCTC GCCTGGGACC TTTGCGCGGC GCGGCGGCGC TGCCTGCCAT CCCCTATATG
CTGGCGCACC TGGCGCGCCG CCGCGCCGTC CTGCGCCAGG CAGACGCCGT GATTGCCGGC
AGTCGCTACA TCGCCGGACG CCTGGTGGAC CTGGTTGAAC CTCAACGACT GCACATTATT
CCGAATATTG TCGATCTGGC GGCAATTGAT GCCGTGATCG CCACTCCCTC GCACCTGGTT
GCGCCCGATG AGCGCTTCGT CCTCTATGTC GGCAAACTCG AACGCAATAA AGGAGCGCAT
CTGCTCGGTG AAATTGTCCG ACAGACAGGC GCAGCGCTCC ACCGCTACAC CCTCGTGATC
GCGGGTAGCG GCCCGTTGCG GACGGAACTG GAGCAAACGG TGCGCGCCGT TGGCATGCGC
GCCCGATTTC TCGACTGGAT CGACCACGAC GAGGTGTTAC GTTTGATGGC GCGATGTGAT
CTGTTGCTCT TCCCCTCGGC GTGGGGCGAG CCATTGAGCC GCGTGCTGCT CGAAGCATGC
GCCTGCGGCG CGCCTATCCT GGCAATGCCC ACCGGCGGCA CACCGGACAT TATTCTCGAT
GGAGAAAGCG GCGCACTCGC GGCAACAGTG CCTGGTTTTG CGCGTCGTCT GACCGAACTG
CTCGAACGAC CGGTCGAGCG CCAGGCGCTT GGCGCCGGAG CACGCCGCCT GGCGGCGCGT
CGCTTCGCCC CCGATATCGT TGCCGGGCAG GTGGAACGTC TCTATCAGTC GCTTGTAGCA
CCGAAGCAGT ATGCAGCGCA GTAG
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| Protein sequence | MHILLPTDVF PPGCGGAGWS AHALALALIT RGHTVTAIVP REGDRGLVTG ETRGVPTVSF
GYRAPRIPFV RNYARNERLW PRLARVMVEA SATHTSHHPA MIIHAQHVQV APAAVMAGQR
LGAPVVISVR DHWPWDYFAT GLHGDRIPHP RQTWASLAAD LPARLGPLRG AAALPAIPYM
LAHLARRRAV LRQADAVIAG SRYIAGRLVD LVEPQRLHII PNIVDLAAID AVIATPSHLV
APDERFVLYV GKLERNKGAH LLGEIVRQTG AALHRYTLVI AGSGPLRTEL EQTVRAVGMR
ARFLDWIDHD EVLRLMARCD LLLFPSAWGE PLSRVLLEAC ACGAPILAMP TGGTPDIILD
GESGALAATV PGFARRLTEL LERPVERQAL GAGARRLAAR RFAPDIVAGQ VERLYQSLVA
PKQYAAQ
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