| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1480 |
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| Symbol | |
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| ID | 5538955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1893169 |
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| End bp | 1893834 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640893618 |
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| Product | winged helix family two component response transcriptional regulator |
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| Protein accession | YP_001431592 |
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| Protein GI | 156741463 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.723328 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGTCGG GACCCGTACC GATCCTGATG GTCCGGCGGC AGGACGCCGC AGCAATTCAG
ATCGAGTGGG ATCGTCCGAT CCTGACTGTG GGTCGTGACC CCGCCAACGA TATTGTGATC
GAACATCCGC TTGCGTCGCG CCGCCATGCG CGCTTCGAGC GCGACGAGAA CGGGTATCTG
ATTCGCGATC TTGAGAGCAC CAACGGAACA TACGTCAATG GCGAGCGGAT CGAAGGGGCG
CAAGTGTTGC ACAATCAGGA TCGCATCTGG GTGGCTGATG CCGAGATTGT GTTCAACGAC
CCTGAAGCGA CGCAGAAGGG ACCGCTGCCG CTTGAGATTC TCAAGCGTGT GCGCGCGCAC
GAGGAGGCGT TGCGTGTCGA TAGCCGCGCG AAAGAAGTCT ATATCCACGG TAAACTCCTT
GATCCGCCGC TGACGGTGAA AGAGTTTCAA CTCCTCGAGT TGCTGTATGC CCACAAAGGG
CAGGTGTTGA GCAAAGACGA GATTGCCAGG AATGTCTGGG ATTACGAGGT GTACGATTAC
AACGCCATCG ATGCGTTGGT CTATCGCCTG CGTCAGCGCA TCGAGACCGA TCCCGGCAAC
CCGCGCTTTG TCGTAACGGT GCGGGGATTC GGGTATAAAC TGATCACGCA GCCGGAACAT
GGATGA
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| Protein sequence | MQSGPVPILM VRRQDAAAIQ IEWDRPILTV GRDPANDIVI EHPLASRRHA RFERDENGYL
IRDLESTNGT YVNGERIEGA QVLHNQDRIW VADAEIVFND PEATQKGPLP LEILKRVRAH
EEALRVDSRA KEVYIHGKLL DPPLTVKEFQ LLELLYAHKG QVLSKDEIAR NVWDYEVYDY
NAIDALVYRL RQRIETDPGN PRFVVTVRGF GYKLITQPEH G
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