| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1475 |
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| Symbol | clpX |
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| ID | 5538950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1883666 |
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| End bp | 1884976 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640893613 |
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| Product | ATP-dependent protease ATP-binding subunit ClpX |
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| Protein accession | YP_001431587 |
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| Protein GI | 156741458 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.42847 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.172988 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCGCA CACGCGGCGG TAATCCCAAC TCGCCGAATG GTCGCGGCGC ATACCTCTGT
TCCTTTTGCG GACGGGGACA GGAGGAGGTG CAGCGTCTGA TCGCCGGTCC CGGCACGGTT
TTTATCTGCG ATGAGTGCGT GGCGCTGTGT AGCGCCATCA TTGCGGAAGA AACCGGCGCG
CGTCCATCAA CACGACGTTC GTCCGCCAGC CTGCCAGCAC GCCTGCCAAC ACCGCGCCGA
CTGCGTGAGT GGCTTGATCA GTATGTCATC GGGCAGGACC GCGCAAAAGT GGTGCTTTCG
GTTGCGGTCT ACAATCATTA CAAGCGACTG CGCGCCGGGC AGAGTGCTGA CGATATCGAG
ATCGGCAAGA GCAATATTTT GCTGATCGGT CCAACCGGCA GCGGCAAAAC GCTGCTGGCG
CAGACGCTGG CGCGCGTGCT CGATGTGCCC TTTGCGATTG CCGATGCAAC GGCGTTGACC
GAAGCCGGGT ATGTCGGCGA GGATGTCGAG AACATTCTGC TGCGGTTGAT CCAGGCGGCG
GATGGCGACA TTGAGCGCGC ACAGACGGGG ATTATCTACA TCGACGAGAT CGATAAGATC
GCGCGCAAGA GCGATAATCC GTCGATCACA CGCGATGTGT CGGGCGAAGG GGTGCAGCAG
GCGTTATTGA AGATTCTCGA AGGGTGCGTG GCGCACGTTC CGCCGGTTCC CGGACGCAAA
CATCCGCAGC AGGAGTATAT CTCGTTCGAT ACGACCCATG TGCTGTTCAT TTGTGGCGGC
GCCTTCGAGG GTCTCGACAA GATCATCGAT CAGCGCATCG GCGGCAAGCG CAGCATTGGC
TTCCACGCTG GCGAGCCGTC CGACGCACCG ACATCGCTGC TGTCGCAAGT GACGCCGGAC
GACTTGCTGC GCTATGGCTT CATCCCTGAA TTCGTCGGAC GGTTGCCGGT CGTCGCAGCG
CTCGATCCGC TCGATAAGCA GGCGATGATT CGGATATTGA CCGAACCGCG CAACGCGATC
ATCAAACAGT ACCAGAAGAT GCTCGCCCTC GACCACGTCG AACTTGAGGT CACGCCCGAT
GCGCTCGAAG CCATCGCGGA TCGGGCGCTC AGGTCGAAAA CGGGGGCGCG CGCCCTGCGC
ACAATCGTCG AGGACATCCT GCTCGACGTA ATGTATGAAG TGCCGTCGCA GGAGCACATC
GGACGCTGCA TTATCAATGC CGAAGTAGTC GAAGGGCGCG GGCACCCGAT CCTGGTGCCG
CGCTCCGCCG AACGGCAGGA GTACCGCCGC CGTATGGACG AGGCGGTGTG A
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| Protein sequence | MSRTRGGNPN SPNGRGAYLC SFCGRGQEEV QRLIAGPGTV FICDECVALC SAIIAEETGA
RPSTRRSSAS LPARLPTPRR LREWLDQYVI GQDRAKVVLS VAVYNHYKRL RAGQSADDIE
IGKSNILLIG PTGSGKTLLA QTLARVLDVP FAIADATALT EAGYVGEDVE NILLRLIQAA
DGDIERAQTG IIYIDEIDKI ARKSDNPSIT RDVSGEGVQQ ALLKILEGCV AHVPPVPGRK
HPQQEYISFD TTHVLFICGG AFEGLDKIID QRIGGKRSIG FHAGEPSDAP TSLLSQVTPD
DLLRYGFIPE FVGRLPVVAA LDPLDKQAMI RILTEPRNAI IKQYQKMLAL DHVELEVTPD
ALEAIADRAL RSKTGARALR TIVEDILLDV MYEVPSQEHI GRCIINAEVV EGRGHPILVP
RSAERQEYRR RMDEAV
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