Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1469 |
Symbol | |
ID | 5538943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 1875883 |
End bp | 1878294 |
Gene Length | 2412 bp |
Protein Length | 803 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640893607 |
Product | peptidase S45 penicillin amidase |
Protein accession | YP_001431582 |
Protein GI | 156741453 |
COG category | [R] General function prediction only |
COG ID | [COG2366] Protein related to penicillin acylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.169908 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGTTGC TGAAACGCCT GCTTCTCTGG ATGGTGCTGG TCCTGGTCAT CGTGACCGCG CTTGGCGCTG GCGGCGGGTA TCTATGGTTG CGCCGCTCGC TGCCACAGAC AAGCGGTGAG ATTCGGGTCA GCGGGATCAG CGGCCCGGTG ACGATTGTGC GCGATAGCGA TGGCGTGGCG CACATTACCG GCGCAACTGA GACGGATGCT GCGTTCGGGT TGGGGTTCGT TCATGCACAG GAACGGCTCT GGCAGATGGA GGTGCAGCGC CGTATCGGTC ATGGTCGACT TTCCGAGGTC TTCGGCGCAA CCACGCTCAA CACCGACCGC TTCCTGCGCG CGCTTGGCGT GGCGCGCGCT GCGCGCCGCG CCCTTGAACG GCTCGATGCC AACACTATTG CCATCCTTGA AGCCTACGCA GCTGGTGTCA ACGCCTTTCT GTCCACCAAT CCGACACTGC CGCCGGAATT CCTCATCCTC GGCGTTCAGC CTGAACCGTG GCAACCGGTC GACTCGCTCG TCTGGGCGAA AATGATGGCG TGGGACCTCG GCGGCAACTG GAACGATGAG GTGATGCGCG CGCTGCTCAT TGCGCAGATT GGACCGGAGG ACGCCGATTT TCTGATGCCC GCCTACACGA CTGATGGACC GTTGATCCTG CCGGACGCGG CGTTGGTCCG TCCCGCAGCA GCATCCACCC CACCGGACGC TGCGATCCAG CCCGACACGG CGCGCGCGAT GCTCGATCTT TGGGAAACAG TGCATGCGAC GACTGGATTG GGTGACCGGC TGGCCGGCTC AAACAACTGG GTAATCGGCG GCGCGCGCAC CGCGAGCGGC AAGCCGCTGC TGGTCAACGA TCCGCATCTC GGCAACCGCA TCCCTTCGAT CTGGTATCTG GCGCATATGC AGGGCGGCGC GATCAATTCC ATCGGCGCCA CCTTCCCCGG TCTGCCGGCA GTCGTTATTG GCTACAATGA GCGGATCGCC TGGGGTGTGA CCAATACCGG TCCTGATGTG CAGGACCTCT ATATCGAACG GATTGACGCC CAAAATTATG TCGAATACAA TGGCAAGCGC GAACCGGTGA CGCTGATCGA CGAGACGATC AATGTCAAAG ACGCAGAGCC GGTGACGCTG ACGGTGCGCA TCACCCGCCA TGGTCCAATC ATCAGCGATG TAACCTCCGG CACCGGCGAG ACGCTGGCAT TTCGCTGGAC ATCGCTCGAC GAGGAGGATG CCACGATCCG CGCCTTTCTC AATATCAACC GGGCGCACAA CTGGGAAGAG TTCACGACGG CGCTGCGCGA TTACAAAGCG CCAATGCAGA ACTTCGTCTA CGCTGATGTC GAGGGCAATA TTGGCTACTA TGCCCCAGGT GCGCTCCCCA TCCGTCGCAA TGGCGATGGG AGGTTGCCTG TGCCGGGATG GACCGACGAA TACGAATGGG CTGGGTACGT GCCGTTCGAG GAGTTGCCCC ACGTCTACAA TCCGCCACAA GGCTATATCG TCACTGCCAA CAATCGGGTG ATTGGCGACG ACTATCCGTA TCTCCTGGGA ACTTCGTGGG CAGCGCCATA TCGGGCGCAG CGCATCGTTG AGATGATCGA TCAGGGTAAT CGGTTGACCG TCGCCGATAT GCGCGCGATG CTTGGTGACG TTGTCTCGGT GCAGGCGCGT GAGTTATTGC CGACGCTCCT CGCCGTTTCG CCAACCGGAC CGCGTGAAGC CGCTGCGCTC GAACTGCTGC GCGGCTGGGA CGGCGCTATG CGCGGCGATA GCGCGGCTGC CTCCGTCTAC CAGGGGTACT ACTATGCCGC CATTGAAGCG ATCTTTGCCG ATGAACTGCG TGATCTCTTC ACCCGCCAGT ACCAATCCAG ACGCGACTTT CCGGCGATGG CGCTGCGCGC CGTGTTGCTC GACGGTCACA ACGAGTGGTG CGACAACGTA ACGACGGTTG CTGTCACAGA AGACTGCGCA ACCACGCTGG CAAAGGCGCT GACGCAGGGG CTGGAGGCGA TGGCAAAAGC GCAGGGCGAA AACGATCCGG CGCAGTGGCG TTGGGATCGC GTTCACCAGG CAGTCTTTCC TCATAATCCA TTCAGCCAGG TGGAGGCGCT GCGCAATGTC TTCGAGCGAC GCATCCCCAA CGGCGGCGAC AATTTCACCG TCAATGTCGC GCCGGTGCGC ATCACCGAGC CATACTTGCA ATACAACGGA CCGTCATACC GCCAGATTAT CGACCTTAGC GATCTGAGCG CGTCGCGGTT CATGCACACG ACCGGACAAT CGGGCAATGT GTTGAGCAGC CGCTACAGCG ACTACCTGGA ACGCTGGCAG CGAGTGGAAG ACGCGCCCAT GCGGTTGAGC GGCGCCATCG ACGGTGATCG ACTCGTCCTG GTGGGGGAGT GA
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Protein sequence | MRLLKRLLLW MVLVLVIVTA LGAGGGYLWL RRSLPQTSGE IRVSGISGPV TIVRDSDGVA HITGATETDA AFGLGFVHAQ ERLWQMEVQR RIGHGRLSEV FGATTLNTDR FLRALGVARA ARRALERLDA NTIAILEAYA AGVNAFLSTN PTLPPEFLIL GVQPEPWQPV DSLVWAKMMA WDLGGNWNDE VMRALLIAQI GPEDADFLMP AYTTDGPLIL PDAALVRPAA ASTPPDAAIQ PDTARAMLDL WETVHATTGL GDRLAGSNNW VIGGARTASG KPLLVNDPHL GNRIPSIWYL AHMQGGAINS IGATFPGLPA VVIGYNERIA WGVTNTGPDV QDLYIERIDA QNYVEYNGKR EPVTLIDETI NVKDAEPVTL TVRITRHGPI ISDVTSGTGE TLAFRWTSLD EEDATIRAFL NINRAHNWEE FTTALRDYKA PMQNFVYADV EGNIGYYAPG ALPIRRNGDG RLPVPGWTDE YEWAGYVPFE ELPHVYNPPQ GYIVTANNRV IGDDYPYLLG TSWAAPYRAQ RIVEMIDQGN RLTVADMRAM LGDVVSVQAR ELLPTLLAVS PTGPREAAAL ELLRGWDGAM RGDSAAASVY QGYYYAAIEA IFADELRDLF TRQYQSRRDF PAMALRAVLL DGHNEWCDNV TTVAVTEDCA TTLAKALTQG LEAMAKAQGE NDPAQWRWDR VHQAVFPHNP FSQVEALRNV FERRIPNGGD NFTVNVAPVR ITEPYLQYNG PSYRQIIDLS DLSASRFMHT TGQSGNVLSS RYSDYLERWQ RVEDAPMRLS GAIDGDRLVL VGE
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