Gene Rcas_1465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1465 
Symbol 
ID5538939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1870006 
End bp1870584 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content60% 
IMG OID640893603 
Producthypothetical protein 
Protein accessionYP_001431578 
Protein GI156741449 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAAGC GGAATGCACG ACAGCCAAAG GCGCTGAAGG TCTCGACCGG GCCGACCCTG 
TACGGGTTGA TGGCTGAGTT CGATGACGCC GAGGCGCTGC TGGCAGCGGC GGAGAAGACA
CGCGACGCCG GGTATAAGCA GTTCGAGGCG TATACGCCGA TGCCTATCCA CGGGTTGGAC
GAAGCCGTCG GGTATCGTGG GACGCGCCTT CCATGGGTGA TCTTTGGTGC GGGGTTGTTG
GGGGCATCGG GTATGTTTGC TTTGCAGACC TGGATCAACC TCGTGGAGTA TCCGCTGAAT
ATTGGCGGCC GGCCGTTGTT TAGCTGGCCT GCGTTTATCC CGGCAACGTT CGAGGGCATG
GTGTTGCTGT CGGCATTTGC TGCCGTCTTT GGAATGATCG CTGCATGCGG TCTGCCGCGA
CCATACCATC CGGTGTTCAA TGCGCCGAAT TTTGAGCGGG CGTCGGTTGA TCGCTTCTTC
CTGTGCATCG AAGCAGCCGA CCCCAAGTTC GAACTGAAGC AGACGCGCCA GTTCCTGGAG
AGCCTGGGTC CGCTGGCGGT CTCGACCGTA GATAACTAG
 
Protein sequence
MLKRNARQPK ALKVSTGPTL YGLMAEFDDA EALLAAAEKT RDAGYKQFEA YTPMPIHGLD 
EAVGYRGTRL PWVIFGAGLL GASGMFALQT WINLVEYPLN IGGRPLFSWP AFIPATFEGM
VLLSAFAAVF GMIAACGLPR PYHPVFNAPN FERASVDRFF LCIEAADPKF ELKQTRQFLE
SLGPLAVSTV DN