Gene Rcas_1462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1462 
Symbol 
ID5538936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1864782 
End bp1865462 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content58% 
IMG OID640893600 
Producthypothetical protein 
Protein accessionYP_001431575 
Protein GI156741446 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0873129 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAGAAA GGCGCCCCAT GGCCCAGGTA TTCGATCGGA GAGCCAATAC GCTCGCCAGG 
GTGAGTATTT TTGCCGGTAT TCCGCTGGTG CTGGCGATTC TCGGCGGAGT CTGGTGGCTG
TTCGGCTGGT CGGACTGGCA CCGTGACGTG GGTGTCGAGA TTCCACAGCC CGGCGGCGGG
TTCAACCATC AACTGCACGT CGCGCTGGGA ATGGATTGCC GCTACTGCCA TACGGCGGTT
GAGGTCTCGG CTCACGCGAA CATTCCGCCA ACCGAGACGT GTATGGGGTG TCACTCGCAG
ATCATCAGCC GCAGCGAAAA GGTCGCTTTC GTCTGGCAGA GTTGGGAAAC CGGGACTTCT
ATTCAGTGGA ATAAAGTTCA CGACCTGCCC AAGTTCGTCT ACTTCAACCA TAGCATCCAT
GTTGCCAAGG GCGTTGGCTG TTCGACGTGC CACGGGCGCA TCGATCAGAT GCGCGTGGTG
TACAAGACGC AGCCGCTGTT TATGTCGTGG TGTCTGGATT GCCACCGCAA CCCGGAGAAG
TATGTCCGCC CGCGTGAAGA AGTCTTCAAT ATGGCGTGGA CACCGCCACC CAATCAACTG
GAGGTTGGGC GACGCCTGGT GCAGGAATAT GAAATTCGCT CGTCGTGGGA ATTGACGAAT
TGCGCCATTT GCCACCGCTA G
 
Protein sequence
MLERRPMAQV FDRRANTLAR VSIFAGIPLV LAILGGVWWL FGWSDWHRDV GVEIPQPGGG 
FNHQLHVALG MDCRYCHTAV EVSAHANIPP TETCMGCHSQ IISRSEKVAF VWQSWETGTS
IQWNKVHDLP KFVYFNHSIH VAKGVGCSTC HGRIDQMRVV YKTQPLFMSW CLDCHRNPEK
YVRPREEVFN MAWTPPPNQL EVGRRLVQEY EIRSSWELTN CAICHR