Gene Rcas_1460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1460 
Symbol 
ID5538934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1862905 
End bp1863330 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content60% 
IMG OID640893598 
Producthypothetical protein 
Protein accessionYP_001431573 
Protein GI156741444 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.355787 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGGT TCTTTCAGTA TCTCAATGTT TTCCCAATGC CACTCTGGCT GGCGATGATG 
TTCGCCCCCG GGAATCCGCT CACCGAGCGG ATGAGCCGTC CGGGACCACT GTTTATCATC
ACCGGGCTGA ACTACATTGT CGCACTGGCG CTGGCAGTAC GGCGCGGGCA GCGCGATGGC
GCGGCAATAG ATTTTACCTC ACTTGAGGGA ATTCGCAAGG GGATGAGTTC GCCGGAAGGC
GCTGCTGCGG CGTGGGCGCA CATGCTCGCC CTCGATCTCT TCAGCGGCGC GTGGATCTAC
CGTGAGTGCC GCCGTCTGAA CGCACCCTGG CAGGTGCGCA TCCCCGCGCT CTTTGCAACG
TTGATGGCAG GTCCTGCCGG ATTGATGGGG TTTCTGCTCT GGCGTTTGAG GAAAGGCGAG
GAATGA
 
Protein sequence
MERFFQYLNV FPMPLWLAMM FAPGNPLTER MSRPGPLFII TGLNYIVALA LAVRRGQRDG 
AAIDFTSLEG IRKGMSSPEG AAAAWAHMLA LDLFSGAWIY RECRRLNAPW QVRIPALFAT
LMAGPAGLMG FLLWRLRKGE E