| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1459 |
|---|
| Symbol | |
|---|
| ID | 5538933 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 1861819 |
|---|
| End bp | 1862832 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640893597 |
|---|
| Product | cytochrome oxidase assembly |
|---|
| Protein accession | YP_001431572 |
|---|
| Protein GI | 156741443 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1612] Uncharacterized protein required for cytochrome oxidase assembly |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.494782 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGCCA TACAAAAACG TGCATCTAGA GCGCCTGGGA AGGAAGAATC GATGCTGACG
CGCAATCGTT TCCCTCTGTA TACGTGGGGA GTGCTGATCT ACAATCTGCT GGTCATTCTA
TGGGGCGCCT TCGTTCGTGC AACGGGTTCC GGCGCGGGAT GCGGCAGTCA TTGGCCCCTC
TGCAACGGCG AAGTCATTCC GCGCGCGCCA GCCGTCGAAA CCATGGTCGA GTTCACCCAT
CGTCTGACGA GCGGTGTGGC GTTGCTCATG GTGGTCGGCA TGCTGGTGTG GTCCTATCGC
GCTTACCCGC GTGGTCACAT AGTGCGGCGC GGTGCGCTGC TCTCGATGGT GTTCATCATC
ACCGAAGCGC TGCTAGGCGC CGGGTTGGTG CTGTTTGAAT TAGTGGCGCA CAATGCGTCG
CTGACCCGTG CTGTTTCTAT GGCGGCGCAT TTGCTGAACA CCTTCATTCT GCTTGCCTGC
ATCACCCTGA CCGGTTGGTG GTCGTCGGGC GGTGAACCGA TCCGCCTGCG CGGTCAGGGC
GCCGTCGCCT CCTGGCTGAT GACCGGTATG GTGGGGTTGA TCCTGGTCGG AATGACCGGC
GCAGTGATTG CGCTTGGCGA CACGCTGTTC TTCGCTCACA CCCGCGCGGG CGGGAGTGAA
GAGGACCTTG CGCCGCTCGT TGCGGCAATC GTCTCGATCC GTATGATGCA TCCCGCGCTG
GCGATTGGCA TCGGTGCATT TGTAGTGGTT GCCGCGTGGT ATACGAGCAC GGCGCGCCCT
GGCGCCACCA CGCGCTGGCT GGCGATTGCG CTGACGGCAT TGTATGCCGT GCAACTTGTT
GCCGGGTATG TCAACGTCGC GCTTCAGGCG CCGGTCTGGA TGCAACTGGT GCATCTATTC
CTGGCGGATG CGGTGTGGAT TGCGCTCGTT CTGCTGGCGG CATCAGCGCT ACGGGTGAGT
GCGATCACCG CCGAGACACG TGCGGCGGCT TCGATGGTCG GGGCGAAAGG TTAG
|
|---|
| Protein sequence | MRAIQKRASR APGKEESMLT RNRFPLYTWG VLIYNLLVIL WGAFVRATGS GAGCGSHWPL
CNGEVIPRAP AVETMVEFTH RLTSGVALLM VVGMLVWSYR AYPRGHIVRR GALLSMVFII
TEALLGAGLV LFELVAHNAS LTRAVSMAAH LLNTFILLAC ITLTGWWSSG GEPIRLRGQG
AVASWLMTGM VGLILVGMTG AVIALGDTLF FAHTRAGGSE EDLAPLVAAI VSIRMMHPAL
AIGIGAFVVV AAWYTSTARP GATTRWLAIA LTALYAVQLV AGYVNVALQA PVWMQLVHLF
LADAVWIALV LLAASALRVS AITAETRAAA SMVGAKG
|
|---|
| |