| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1446 |
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| Symbol | |
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| ID | 5538920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1847318 |
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| End bp | 1848025 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640893584 |
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| Product | uncharacterized peroxidase-related enzyme |
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| Protein accession | YP_001431559 |
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| Protein GI | 156741430 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2128] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain
[TIGR01926] uncharacterized peroxidase-related enzyme |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCCGGC GCTCTGTTTT CCTCACCCCG CTATGCGCCG TCCGACAGGC GTATAATGAG
AGAGCAACGC ATCGATATGA TGCGCCAATG CCCGTCTGGT TCCACAGTGC ATTGCCGAGA
GAGGTGTGTA TGGACGCCCC CGAACACCCG ATCAGCCGTT TTCCGCTCCC CGTTCGGATC
GATGAACTGC CGCCGGACAT TCGCAAACGG ATTGAGCAGG TCGCCGTGAA GAGCGGCTTT
GTACCCAACA TCTTTCTGGC GCTCGCCCAT CGTCCCGACG AATTTCGCGC CTTTTTCGCC
TACCACGACG CGCTGATGAA TCGCCCCTCA AACCTTTCTC AAGCAGAAAA GGAAATGATC
GTGGTGGCGA CTTCGGCGGT CAACGATTGT CTCTATTGCG TGATCGCCCA CGGCGCGATT
TTGCGGATCC GCAGCAAAAA CCCGCGCCTC GCCGAACAAA TTGCCGCCAA TTACCGCCGT
GCCGAGATCA CCCCACGCCA GCGGGCTATG CTCGATTACG CGCAGAAAGT GGCAGTCGAT
TCGGCCCGGA TCAGCGACGA TGATTGGCAG CCGCTCTATC AGCACGGCTT TACACAAGAA
GATATCTGGG AGATCGGCGC AATTGCCGCC TTCTTCGCTA TGAGCAACCG TCTCGCCAAT
ATGAGCGCAT TACGCCCGAA TGATGAGTTT TATGGGATGG GACGCTGA
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| Protein sequence | MSRRSVFLTP LCAVRQAYNE RATHRYDAPM PVWFHSALPR EVCMDAPEHP ISRFPLPVRI
DELPPDIRKR IEQVAVKSGF VPNIFLALAH RPDEFRAFFA YHDALMNRPS NLSQAEKEMI
VVATSAVNDC LYCVIAHGAI LRIRSKNPRL AEQIAANYRR AEITPRQRAM LDYAQKVAVD
SARISDDDWQ PLYQHGFTQE DIWEIGAIAA FFAMSNRLAN MSALRPNDEF YGMGR
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