| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1445 |
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| Symbol | |
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| ID | 5538918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1844613 |
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| End bp | 1846547 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640893582 |
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| Product | N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD |
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| Protein accession | YP_001431558 |
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| Protein GI | 156741429 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3023] Negative regulator of beta-lactamase expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCCC TGCTCCGCCA GAGAGGTGTT CGGTTGACCT CACAAGACGT CACTACCGGC
ACACCGCCCA TGATCGGGCG TTGCCTGACC ATTCCGCAAT GGCTCGACTA CGTTGCCCGC
TATCAGTTCG GGCAGTTGAC CCCATCGAAA GTGGTGCTGC ACCACACCTG GCGCCCAACG
GTGCAGCAGT GGCGCGGTCT TGCCTCGATG CAGGGAATGC AGCGCTACTA TGCCAATAAG
GGATGGGCAT CCGCCCCCCA TATTTATGTC GCTCCCGACG GTATCTGGCT GTTTACGCCA
ATGAAAGACA TCGGCATCCA TGCCGGTCCC GGCAATGGCA GCCTGAAAGC CGGATGGTAC
TCTATCGGCG TCGAGATGGT CGGCGACTAC GACCGTGAGC GGCCATCAGG CGCAGTGTGG
GAAGGAACAA AAGCGGTGCT TGGCGGGTTA TCGCGGCGGC TGAATATCCC CCCCGCAACC
CTGCTCGCCT TCCACCGCGA CTACAGCAAG AAAAGTTGCC CCGGATGGGC GGTTACAAAA
GAATGGGTGC TCGGCGAGGT CAATGCCTGG CTCAACAATG CTGCGCCGCC GCCGCCGCCA
CCGCCCGGTC CGATCGGTTC CATTCCGCCG GAGATCGAGG AACTCGCCGA GGCGCTGCTC
GAGCAGAGTT ACGCCCGTCG CGCCGAGGGG TACAACAGCA GTTGGGCGTT CCATCAGTTC
GCCGTCGAGA ACAATCTGGG CTTTCCAATG GCGAAGAGCC AGCGATTGCA ACACGGCGGG
AAGACCTACG CCTATCAGCC GTTTGCCCGT GATACGCTCT TTTGCGAATC GCCGAACTGG
GGCGACGTAC AGCGCCTGTC GCAGTTGCTC GCCGGTTCTA TTCCGCCGCC GGGAACACTC
GGACGCGCTC TGCTCGACGC CACCTACGCC ACCGGCGGCT CGCCGTTTCG CCCCGATTGG
GCATTCCACC AGTACGCCGT TGCCGGCCAG ACTCTTGGTC CGCCGCTGGA GCCGAGCAAG
AAACTGGTGG TGGACGGAGT TTCCTACAGT TATCAGGTCT TCGCCACCGA CACGATTTTC
AACCGTGGCA CGGAATGGCA GAACATTCAG CGCCTTAGCG CGCTCGCCAA CACCACGAAC
CCGGCGCAGG CAAAGGTGCG CGACGAACTG CTCAAAGCCA CTTACGCCGC CGCCGGGCAA
CAGTACCGCC CCGACTGGGC ATTCCACCAA CTTGCCCGGC AATGGAACCT CGGCGCGCCG
CTGGGGAAAA CCGACCCGAT CACCGTCGGC GACAAACAGT ACAACTTCCA GGTCTACGCC
ACCGACACGA TCTACAACAT TGTGCCGAAC TGGAGCGACG TGAAGCGCCT GAGCGCAATC
TTCGGACCGC AACAAATGCT GCTCGCCGCT CCCGCGCCGG TCGCCAGGCT TCTGTCGCCG
GGCGCGGTTT TTGCGCCGGA ATGGGACGCC TTCCACATTC AACGCTTTGC GGTTGCCGGG
CGCGCGCCGA GTGCGTATGG CAGTCGGAGC GGCTCGAAGA TTCGCCTGAT CGTCCTCCAC
GGCGATGCAG GACCGGCGCT TCAATCGCTC GAAACGATGG CAATGCCCGG ATCGCCACGC
ATGCCGCACT ACTATGTCGC CGCTCATGGC GCGATCTATC AGTTGATCGA CGACGAGTTC
GCTGCATTCC ACAGCGGCAT GGCGTACTGG GACGGCGCGC GGCGCAACAT CAACCGCAGC
AGCATCGGCG TCATGCTGGA ACGTCCGCAC ACCGGCTACA CCGATGCATC CCAACGCGCT
CTTTCCTGGT TGATTGCCCA TCTGCGCGCG AAATACAACA TCCCGGCATC CGGCGTCGTC
CGCTGGAGCG ATCTGTCACC CGACGCCGCC GGCGATCTCG CCGATCTGCC GGGGAACTGG
TATCGGGAGG GGTGA
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| Protein sequence | MASLLRQRGV RLTSQDVTTG TPPMIGRCLT IPQWLDYVAR YQFGQLTPSK VVLHHTWRPT
VQQWRGLASM QGMQRYYANK GWASAPHIYV APDGIWLFTP MKDIGIHAGP GNGSLKAGWY
SIGVEMVGDY DRERPSGAVW EGTKAVLGGL SRRLNIPPAT LLAFHRDYSK KSCPGWAVTK
EWVLGEVNAW LNNAAPPPPP PPGPIGSIPP EIEELAEALL EQSYARRAEG YNSSWAFHQF
AVENNLGFPM AKSQRLQHGG KTYAYQPFAR DTLFCESPNW GDVQRLSQLL AGSIPPPGTL
GRALLDATYA TGGSPFRPDW AFHQYAVAGQ TLGPPLEPSK KLVVDGVSYS YQVFATDTIF
NRGTEWQNIQ RLSALANTTN PAQAKVRDEL LKATYAAAGQ QYRPDWAFHQ LARQWNLGAP
LGKTDPITVG DKQYNFQVYA TDTIYNIVPN WSDVKRLSAI FGPQQMLLAA PAPVARLLSP
GAVFAPEWDA FHIQRFAVAG RAPSAYGSRS GSKIRLIVLH GDAGPALQSL ETMAMPGSPR
MPHYYVAAHG AIYQLIDDEF AAFHSGMAYW DGARRNINRS SIGVMLERPH TGYTDASQRA
LSWLIAHLRA KYNIPASGVV RWSDLSPDAA GDLADLPGNW YREG
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