| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1436 |
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| Symbol | rplT |
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| ID | 5538909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1830102 |
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| End bp | 1830455 |
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| Gene Length | 354 bp |
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| Protein Length | 117 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640893573 |
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| Product | 50S ribosomal protein L20 |
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| Protein accession | YP_001431549 |
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| Protein GI | 156741420 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0292] Ribosomal protein L20 |
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| TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.287135 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCCGCG TGAAACGTGG TGTGATGGTG CGCAAGCGCC ATAAAAAATT GCTCGAGCAG
GCGAAAGGGT ATCGCGGCAG CCGCAGCCGT CGCGTCAAAG TGGCGCGCGA AACGGTGATG
AAGGCGCTCT GGTACGCCTA TCGCGACCGG CGCAATCGCA AACGCGATTT TCGCCGCCTC
TGGATTATCC GTATCAATGC CGCTGCTCGG ATGCACGGCA TGTCGTACAG CCGCCTGATG
AACGGTCTCA AGCGCGCTGG CATCGAACTT GATCGCAAAG TGCTCGCCGA TATGGCGGTG
CGCGATCCTG CCGCCTTTGG GCGGGTCGTC GAACAGGCGC AGCAGGTGGT GTGA
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| Protein sequence | MARVKRGVMV RKRHKKLLEQ AKGYRGSRSR RVKVARETVM KALWYAYRDR RNRKRDFRRL
WIIRINAAAR MHGMSYSRLM NGLKRAGIEL DRKVLADMAV RDPAAFGRVV EQAQQVV
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