Gene Rcas_1430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1430 
Symbol 
ID5538903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1825457 
End bp1826299 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content62% 
IMG OID640893567 
Producthypothetical protein 
Protein accessionYP_001431543 
Protein GI156741414 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.332764 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACACC AGTTGCTGGC GCTGGACTTT TCGGGCATGT TGAGCCTGGA GGCGGTGCGC 
TTCGGTATGC CGGATCGCCT GGAGCGGACG CTACGTCACA GCGGGCTATG GGACCTGGGT
GTGGATGTCG AACGCTACTG GAACGACATC GTGAAGCCGA CGTGGGAAAC CGGCAGCACA
ACACCCACCC CATATGCGCT CCTTATCGCC CGGCGTCTGT CGTGTGACGA CGCGCTTCAG
CGTGCTGAAC GGTTCGTGCA GGCATACCTT CAGGCATCGG TCATCGACCC GGCGTGGCGC
CCGCTCTTCG ACGCCATGCA ATCGGCGGAG CATATGACGC CTCTGGTCGC CACCGATCAC
TACGCTGAAG CCACCGACCA TATTGCGCGA CAGATCGCCG CGATGGGATG GCACGCAGCG
GCATTGCGCA CCGATGACAC CGGCAAAACG TCACCGCAGA TTATCTCGAC GCCGAATGGC
GATCGTCCGC CATCACGCGC CGTCCTGATC GCCAATTCAG CCGACCTTGG CGTGCGCAAA
GACAGCGCGC TCTTCTGGCG GCGTGTGCAG GAAGGACTCG GCGAACAACC AACCGAGATT
CTAATCGTCG ATGACTTTGG CGCCAATGAA AACCTGCTCG ACTTCTACGC CGATCCGGTC
AAGGTCAATC GCCGACAGGC GCAGACCATC GATGCCATGC GCAGCGTCTT CGGCGCGCCG
GTGCAGACAT TCCCTTTCAT CCTCGACCGA ACTCTTCCTG ACCGGGAGGC GCTGTATGCC
GCCTATCGCG CGAAGGTGGA GGCAACGGTC AGGGAGATGG TGACGGTTCT TCACGGCAGG
TGA
 
Protein sequence
MTHQLLALDF SGMLSLEAVR FGMPDRLERT LRHSGLWDLG VDVERYWNDI VKPTWETGST 
TPTPYALLIA RRLSCDDALQ RAERFVQAYL QASVIDPAWR PLFDAMQSAE HMTPLVATDH
YAEATDHIAR QIAAMGWHAA ALRTDDTGKT SPQIISTPNG DRPPSRAVLI ANSADLGVRK
DSALFWRRVQ EGLGEQPTEI LIVDDFGANE NLLDFYADPV KVNRRQAQTI DAMRSVFGAP
VQTFPFILDR TLPDREALYA AYRAKVEATV REMVTVLHGR