Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1430 |
Symbol | |
ID | 5538903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 1825457 |
End bp | 1826299 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640893567 |
Product | hypothetical protein |
Protein accession | YP_001431543 |
Protein GI | 156741414 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.332764 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACACC AGTTGCTGGC GCTGGACTTT TCGGGCATGT TGAGCCTGGA GGCGGTGCGC TTCGGTATGC CGGATCGCCT GGAGCGGACG CTACGTCACA GCGGGCTATG GGACCTGGGT GTGGATGTCG AACGCTACTG GAACGACATC GTGAAGCCGA CGTGGGAAAC CGGCAGCACA ACACCCACCC CATATGCGCT CCTTATCGCC CGGCGTCTGT CGTGTGACGA CGCGCTTCAG CGTGCTGAAC GGTTCGTGCA GGCATACCTT CAGGCATCGG TCATCGACCC GGCGTGGCGC CCGCTCTTCG ACGCCATGCA ATCGGCGGAG CATATGACGC CTCTGGTCGC CACCGATCAC TACGCTGAAG CCACCGACCA TATTGCGCGA CAGATCGCCG CGATGGGATG GCACGCAGCG GCATTGCGCA CCGATGACAC CGGCAAAACG TCACCGCAGA TTATCTCGAC GCCGAATGGC GATCGTCCGC CATCACGCGC CGTCCTGATC GCCAATTCAG CCGACCTTGG CGTGCGCAAA GACAGCGCGC TCTTCTGGCG GCGTGTGCAG GAAGGACTCG GCGAACAACC AACCGAGATT CTAATCGTCG ATGACTTTGG CGCCAATGAA AACCTGCTCG ACTTCTACGC CGATCCGGTC AAGGTCAATC GCCGACAGGC GCAGACCATC GATGCCATGC GCAGCGTCTT CGGCGCGCCG GTGCAGACAT TCCCTTTCAT CCTCGACCGA ACTCTTCCTG ACCGGGAGGC GCTGTATGCC GCCTATCGCG CGAAGGTGGA GGCAACGGTC AGGGAGATGG TGACGGTTCT TCACGGCAGG TGA
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Protein sequence | MTHQLLALDF SGMLSLEAVR FGMPDRLERT LRHSGLWDLG VDVERYWNDI VKPTWETGST TPTPYALLIA RRLSCDDALQ RAERFVQAYL QASVIDPAWR PLFDAMQSAE HMTPLVATDH YAEATDHIAR QIAAMGWHAA ALRTDDTGKT SPQIISTPNG DRPPSRAVLI ANSADLGVRK DSALFWRRVQ EGLGEQPTEI LIVDDFGANE NLLDFYADPV KVNRRQAQTI DAMRSVFGAP VQTFPFILDR TLPDREALYA AYRAKVEATV REMVTVLHGR
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