Gene Rcas_1425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1425 
Symbol 
ID5538898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1819546 
End bp1820715 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content45% 
IMG OID640893562 
Productsite-specific DNA-methyltransferase (adenine-specific) 
Protein accessionYP_001431538 
Protein GI156741409 
COG category[L] Replication, recombination and repair 
COG ID[COG3392] Adenine-specific DNA methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.310962 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGGGACA ATCAATCGCT TATCATCGGA GATAACTGGC AATTGTCGCT CTGGGAGAAA 
GATGATCCGG TTGTTGAGAA CCCGGAGTAT CTCTCAAGGC AACTCATTAC CTATATCGGC
AACAAACGCG CTCTCCTGGG GTGTATCGGC ATTGCTCTGG AGCGTGTCAA ACGACGGCTC
GGCAAGAATC GATTGCGCGT GGCCGATCTT TTTAGCGGCT CTGGTGTTGT TTCGCGTTAT
ATGAAAGCCC ATGCTTCGTT GCTTATTAGC AATGATATTG AAGACTACGC AGCAGTGACT
TCTCGATGCT ATCTGCGTAA CCGAAGCACA GTGGATTTTG TATTGCTTTC CGAGATAGTT
GCCGATTTGA ACGCCAGAGT CGTTGCTGAG TCTCTTCCGA AGGGCTTTAT AGAGGAAATG
TATGCGCCCA AAGATGAAAA GAACATTACG AAAGAGGACA GAGTCTTCTA TACGCGCGAG
AATGCCAGAA GGATAGATAA CTATCGCCGT CTGATAGAAG AGTGTCCAAA TGAGATGAAG
GATCTTCTCC TCGGGCCGCT GTTGAGTGAA GCCTCTGTTC ATGCAAATAC CGCCGGTGTA
TTCAAGGGTT TTTATAAGAA TCGACACACT GGTGTGGAAC ATTTTGGAGG AAGCGGGTCA
GATGCTCTTA CGAGAATACT GGGTCGTATA ATGCTCGAAT CCCCTGTTCT TAGTCTGTTT
GAATGTGATT ATGAAGTCTT TCAAGAAGAT GCCAACATCC TGGCACGAAG GCTTGAAGGT
CTGGATTTAG TGTATATCGA TCCGCCTTAC AACCAACACC CGTATGGATC CAACTACTTT
ATGCTCAACC TTATTGTACA TTATCAGCGT CCGGCGAATA TCAGTCGCAT TTCAGGAATA
CCCCAAGATT GGCGAAGATC TGGATATAAT GTCAAAAACA AAGCTTTACC GCTTCTAAAA
GATCTACTGG AGCATATCGA CGCTTCCTTT ATTCTGATCT CATTCAACAA TGAGGGTTTC
ATTCAACCAG AAACGATGCG CATTTTGCTT GAAAAGATCG GCAAGGTCGA TGTTATTGAA
TTGCCCTATA ATGCGTTTCG AGGCAGTCGA AATTTCAACA ACAGATCAAT CTACGTCACT
GAATATATGT TTCTTGTTGA GCGCAGGTAA
 
Protein sequence
MGDNQSLIIG DNWQLSLWEK DDPVVENPEY LSRQLITYIG NKRALLGCIG IALERVKRRL 
GKNRLRVADL FSGSGVVSRY MKAHASLLIS NDIEDYAAVT SRCYLRNRST VDFVLLSEIV
ADLNARVVAE SLPKGFIEEM YAPKDEKNIT KEDRVFYTRE NARRIDNYRR LIEECPNEMK
DLLLGPLLSE ASVHANTAGV FKGFYKNRHT GVEHFGGSGS DALTRILGRI MLESPVLSLF
ECDYEVFQED ANILARRLEG LDLVYIDPPY NQHPYGSNYF MLNLIVHYQR PANISRISGI
PQDWRRSGYN VKNKALPLLK DLLEHIDASF ILISFNNEGF IQPETMRILL EKIGKVDVIE
LPYNAFRGSR NFNNRSIYVT EYMFLVERR