| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1413 |
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| Symbol | |
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| ID | 5538886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1808522 |
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| End bp | 1809289 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640893550 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001431526 |
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| Protein GI | 156741397 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGGG CGGTGGTGTT CGATATGGGC GGAACACTGC TCCGGTATCC GCGCCCCGGC
AACGGAACCT GGCGTGAGTC CGAGGAGCGC GGCATCCGCA GGCTGTATCA CTACCTGGTG
ACACAGGGGC ATCCGATTGC CGCTGAAGAA GAAACGTTCG TCGCGCGCAT GTTCGAGCGG
TTGGCGCAGG GATGGGAACA GGCAACCGGC GGGCGCATTA ATCTGCGCGC TATGGACTGG
ATCGCCGCAG GCGCCGCCGA CCATGATCTA ACGCTCTCCG ATGGCGCGCT CATGGAAGCG
GTTCACCACT ATGCCCGCCC GCTGCGCGAT GGAGTGACTG CTATGCCAGG AGCGGCAGCG
ACTCTGGCGG CGCTGCGCGC GCGCGGCGTG CGCATCGGTC TGATCTCCAA TACCATCTGG
CCCGGCGATC TGCACCGTGA AGACTTGATC GCACTGAGGT TGTGGCAGTA TATCGAATAT
GCCGTTTTCT CCGGTGATTT CGGCATCTGG AAGCCCCATC CCCAGGTCTT CCTGCACGTG
CTCGACCATC TTGGCGTCAA CCCCGCAGAT GCCGTCTTCG TCGGCGACAA TCCAAAGGAA
GATGTGCGCG GCGCGCAGCA GGCTGGCATG CGCGCCCTTT GGGTGCGTAG CCTGGAGTTT
CCCCTACTGC CCAACATCCT TCCCGATGCT GTCGTCGAAA ACCCCGGCGA GATTGTGCCG
CTCCTGGATG CCGCCGGCGA ACTGCCGCCT CTGCAACAGG CGCAGTGA
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| Protein sequence | MIRAVVFDMG GTLLRYPRPG NGTWRESEER GIRRLYHYLV TQGHPIAAEE ETFVARMFER
LAQGWEQATG GRINLRAMDW IAAGAADHDL TLSDGALMEA VHHYARPLRD GVTAMPGAAA
TLAALRARGV RIGLISNTIW PGDLHREDLI ALRLWQYIEY AVFSGDFGIW KPHPQVFLHV
LDHLGVNPAD AVFVGDNPKE DVRGAQQAGM RALWVRSLEF PLLPNILPDA VVENPGEIVP
LLDAAGELPP LQQAQ
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