Gene Rcas_1411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1411 
Symbol 
ID5538884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1805571 
End bp1806200 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content68% 
IMG OID640893548 
Producthypothetical protein 
Protein accessionYP_001431524 
Protein GI156741395 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCGTC TCATCCTGCA ACGCAATCGC CTGACCTTGC TGACCTTCGT GGTCATCCCC 
GCCGCCATCG CGGCGATAGC GGCGGCGTGG CTGCTTCGTC CGCAGGCGAC GAGCGGGTCG
CCCCTCGGCG ACCCGAACGC GCCGGTCGTC GCCGCGACGC CCGCCCCGTT CGTCGGCGGA
CAGCCGCCGA TCGCGCGCCC CGCCGCCGTG CCGGTCGAAG CGTATCGCGC CGATGGCGCC
CCCCCGCCGG ACGCTCCCGC CAACTTCATC GAGGCGCGCA TGCCCGATGC GCGCTATCAC
GACGCGGCGT TCGCCGCCGT GCAGTGCGCC GTCGGACGCC CCTTGACGCG CGACCCGGCG
CTCGACGCCC TCGCCGTCGA AGCCTGGCGC GCCGCCGTGC GCAGCGGCAA TCAAGGGAAC
TATGCATTGT TGGAAAAGAA CAACCTTCGC TTCATCCAAA TGGTGCCTGT CGAGCGCCCC
ACGCAGTCGT CGTCCGACGC ATGCCTTTTC GGTGGAGAGG ACATGCGCGC CCAATTCGGC
GATCTTCAGG ATATCACGTC GGTCGGCGTC GCCGTCTTTC CTTACGAAGG CGACTATCCG
TTTATGACCT TGGTCGTCGT CGGACGTTGA
 
Protein sequence
MVRLILQRNR LTLLTFVVIP AAIAAIAAAW LLRPQATSGS PLGDPNAPVV AATPAPFVGG 
QPPIARPAAV PVEAYRADGA PPPDAPANFI EARMPDARYH DAAFAAVQCA VGRPLTRDPA
LDALAVEAWR AAVRSGNQGN YALLEKNNLR FIQMVPVERP TQSSSDACLF GGEDMRAQFG
DLQDITSVGV AVFPYEGDYP FMTLVVVGR