| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1399 |
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| Symbol | |
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| ID | 5538872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1787307 |
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| End bp | 1790144 |
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| Gene Length | 2838 bp |
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| Protein Length | 945 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640893536 |
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| Product | peptidase M23B |
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| Protein accession | YP_001431512 |
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| Protein GI | 156741383 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.173601 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCGA ATGAACAGCA GTCCGCTGTT GCACCAGAGG CGCGCGACAT TGCCCGGAGC
GCTGCACAAC TGGCGGCGCG CCATACCGCA AAGCGCGCCC TCGCAACTGG TGGATCGGCG
GCGTTGAAGG TCGGCGCTGT GGCAGGCGGC AAGGTCGTGC TCATCGTGGC GCTGTGTGTT
GCCGCCATCG TGCTGATCTG CGGACTGGCG CTGATAATTG CAGGCGCACT TGGCACGATC
TTTCAGCACA CGGCGCTCCC CTGGCCCGTG GCGCCGGACG TGCAACCCGA CGGAACCTAC
CGCGCAGGCG GATGGGCGAT TTCCAGTCGC TTCGGCTGGC GCACACACCC GATCACCGGT
CAACCTGAGT TCCATAACGG CATCGACATC GTCAGTCCAA CCGGCGCATG CCCCTTCGCA
CATCGCTGCC TGCTTCCCGC CATGATCGAT GGCGTGGTCA CCTATGTTGG ATGGGACGAA
AACCACGGAC GCCATCCAGA TCAGGAAGGC GGCGGGCAGA TTGTCGTGGT CGAGAGCAAT
CGTGGCGCGT ACCAGACGAT CTATGCTCAT CTGGAACCGT ACCGCCTGCA CGTGCAACTC
CAAGGGCGGA TCGTCGATGA GTATGGACGC TACGACGAGT ATGCCGACTA TCAGCCGATC
GGCGCCGGTG AACTCGTTCC TGACGTTTCT GACGGGGCGA TTGCCATCTC GTGTCGGGGT
GATATGCCGA TGTTCACGCC GACTCGCAGC GGCGCAACCA TCACCTTCCT CTACGACCGG
CCTGCCGACT GTCAGACCAG TGTGATGTGG GGAGAACGCG GCGATGGCTG GCGCGGCTGG
ATCGCCGACG ATCCGCCGAC CAATGCGCAG GGACAGGCAA CCCTGCGCTG GCAGACGCCA
CTCAACGGCA CACGCAGTGA ACGCCGCGCC GGGGATGTGG CGCTGCGCTT CCGCGCCTCC
CTCGTGCCAC CGCCGCCGCC AACTCCGACC CCGACGCCAC CGATTACGCC GACGCCTGGA
GTGAATGCGT ATCAGACCGA GACGGTGATG CTAGCGATGC AGACAGACGA TCAGGAAATC
GATCAATCTC CCGCCTGTCA TCCGACGGTT GATGGCACGC GTTGCGTGTG GCAGTTGGCG
GATATTCCGG TCGCTTCGCA GCAGAATATC GTCCTGCGCG GCGCGTATGG CACAGGGAGC
CTTGCGCCAC GCGCCGTATC GGTCGCTCTC ACGAGCGTTT CGCCTTCTCC AAGCCCAACA
TCGCCGCAGA ACGCCATATC GTTTCTGGAC GCCAGCATGA GCACGGTGGG GTCCTATCGA
GTGCCGGTTG GCGGACGTCG CCGGATTGCG TTTGCCGGCA CGAGCAGCGA CTGGCCCCTG
ACCGTCGAGA TCGATGCTGG CGAACATTTG ATGGTACTGG GGGTGACCGG CGTTTCCGGC
GGCGTGCAGT GCTCATCAAC CGAGAGCAGC GTTCAGTGTC GCGCCGACGG ACCGCACGTG
CTCTGGGTCG AGTTCGTCGT CGAGGTGCGC GCCAACGCGC CAATGAATAG CATTCAGACC
CTGAACGGGA CCCTCCGATC GCCGGTGCGA CAGACCGGCG CAACGCTCAA TCTGCTCATC
GATCCATATG CGGTGACTCC CGGACCCTGG CCCCCACCGA CGCCGCTACC GACGGCGACG
CCAGCGGCGT ACCCTTTCCC GGCGACCGCC ACAACGCCCC CTTTTCCACC GGAAATCACG
CTCCCGGAAG TGACGCCAAT AGCCGGACCC TCGCCAGAAC CTGGACAGGG ACCAGGGCAA
TCGCCACTGG CATGCCGACC GCAAGCGCTC GTGCCGTTGC CGGGAGTTGT CAATGCCGCA
GGAACTACCA CGAATATGGC GCTGGCAGAG GACGCGGCGC ACAGTTTCGC CGCCGTGCGC
GCCGAGATCA TCGCAACCGC CGGTCAGGAC CCGCTGGCGC GCCTGGCGGA CGCGCTACGT
GCACCGGAGT TTCGCTCGAA CAAACCAGGG GTTGCACTGA TGTCGTGGCA TATGACGGGG
CGGGCGATAG ATCTGGACAC CGGTTTCCCC TGGCGGCGGG TGCGTGAAGG GCGACTGTGG
CGACTGTATA TCAACCTGAC TGATGTGACC GCTATCTTCG AGCGTCATGG CTGGAACCGC
ATTCCAGACC GCGCCGATTC ACAGGAGTGG TGGCACTATG AATATCACCC GAATGGCATC
AGTTGGGCGA GCGCCATGCG CGAAATCTGG ACCCTCGCGC GGTTGCAGAT GGCATTCCCG
CAGATCAATT GGCTCAGTGT CGGTTGCCGG TCAACGCTGC CAGACGGCGC GATGCCATTG
CCAGACGACA TGCACGAACG TTGCCTGGCG GGCGCCCCCG CGTTTGCGCG CGCCGTCGAA
GCCTTGCCCG GCTGTGGTCC GCCGGTGCGC CCTGGGGACC GCGTGTATCA ACTGGAGTCG
CCGTTGGGAT TCGTCGGGCT GACCGGGCAA ACGACCGGAC CGCACCTGCA CCTGGGGATA
CGGCAGCGCG GATATGCGGG AGATCTTCCG ATGATCAACA TTTGCACACC GGAGTGGTTG
CAGGGTGTGC AACCATTGCC CGACGCCGAC TGCTGGACAG ATATGGTCGA TCCGCTGGCA
TTCCTGCCGC TGGCGCCACC GAACAACAGC GCCGGATTGC CGGAAGGCGC TCCGTATCAG
TTGCCGCCGC CAGATTACCC CGGATCGCTC TACCGCGAAC CGCGTCCCGG TGAACCGCCG
GTCGGTCAGT ACTGGTCGCC CGACGCGGAC GGCGGAAGGT ATGGCGGCGG CAAATCAGGA
CGATCCACAT CACGGTAA
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| Protein sequence | MSANEQQSAV APEARDIARS AAQLAARHTA KRALATGGSA ALKVGAVAGG KVVLIVALCV
AAIVLICGLA LIIAGALGTI FQHTALPWPV APDVQPDGTY RAGGWAISSR FGWRTHPITG
QPEFHNGIDI VSPTGACPFA HRCLLPAMID GVVTYVGWDE NHGRHPDQEG GGQIVVVESN
RGAYQTIYAH LEPYRLHVQL QGRIVDEYGR YDEYADYQPI GAGELVPDVS DGAIAISCRG
DMPMFTPTRS GATITFLYDR PADCQTSVMW GERGDGWRGW IADDPPTNAQ GQATLRWQTP
LNGTRSERRA GDVALRFRAS LVPPPPPTPT PTPPITPTPG VNAYQTETVM LAMQTDDQEI
DQSPACHPTV DGTRCVWQLA DIPVASQQNI VLRGAYGTGS LAPRAVSVAL TSVSPSPSPT
SPQNAISFLD ASMSTVGSYR VPVGGRRRIA FAGTSSDWPL TVEIDAGEHL MVLGVTGVSG
GVQCSSTESS VQCRADGPHV LWVEFVVEVR ANAPMNSIQT LNGTLRSPVR QTGATLNLLI
DPYAVTPGPW PPPTPLPTAT PAAYPFPATA TTPPFPPEIT LPEVTPIAGP SPEPGQGPGQ
SPLACRPQAL VPLPGVVNAA GTTTNMALAE DAAHSFAAVR AEIIATAGQD PLARLADALR
APEFRSNKPG VALMSWHMTG RAIDLDTGFP WRRVREGRLW RLYINLTDVT AIFERHGWNR
IPDRADSQEW WHYEYHPNGI SWASAMREIW TLARLQMAFP QINWLSVGCR STLPDGAMPL
PDDMHERCLA GAPAFARAVE ALPGCGPPVR PGDRVYQLES PLGFVGLTGQ TTGPHLHLGI
RQRGYAGDLP MINICTPEWL QGVQPLPDAD CWTDMVDPLA FLPLAPPNNS AGLPEGAPYQ
LPPPDYPGSL YREPRPGEPP VGQYWSPDAD GGRYGGGKSG RSTSR
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