| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1387 |
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| Symbol | |
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| ID | 5538860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1774448 |
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| End bp | 1774858 |
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| Gene Length | 411 bp |
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| Protein Length | 136 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640893525 |
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| Product | DNA mismatch endonuclease vsr |
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| Protein accession | YP_001431501 |
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| Protein GI | 156741372 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3727] DNA G:T-mismatch repair endonuclease |
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| TIGRFAM ID | [TIGR00632] DNA mismatch endonuclease Vsr |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGATG TCTTTCAACC AGAAGAGCGC AGTCGCATTA TGGCGAAGGT TCGCGGCGAA
AACACCTCGC CGGAACGCCT GGTGCGCTCG CTGGCACATC GAATGGGGTA TCGGTTTCGC
CTTCATTGCA AGGATTTACC CGGCAAGCCT GATATTGTTT TGCCGCGCCA TAAGAAGGTC
ATCTTTGTGC ACGGCTGCTT CTGGCATCAG CATGAAGGGT GTCCCCACGC CGCGCGACCG
ACGAGTAATA TCGAGTACTG GAACCGGAAA CTTGATCGCA ATATGGTCCG TGACCGCGAA
AACCTGCACA AACTCGCATA TCTTGGCTGG AATGTGCTGA TCGTTTGGGA ATGCGAAACG
CGCGACCGCG ACAAACTGCT CGAAAAACTG AAAGGGTTCC TCTTGTCCTG A
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| Protein sequence | MPDVFQPEER SRIMAKVRGE NTSPERLVRS LAHRMGYRFR LHCKDLPGKP DIVLPRHKKV
IFVHGCFWHQ HEGCPHAARP TSNIEYWNRK LDRNMVRDRE NLHKLAYLGW NVLIVWECET
RDRDKLLEKL KGFLLS
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