| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1385 |
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| Symbol | |
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| ID | 5538858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1772144 |
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| End bp | 1773418 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640893523 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001431499 |
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| Protein GI | 156741370 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1486] Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.382298 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATATCG TTGTCATTGG CGGCGGCAGC ACCTATACCC CCGAACTCAT CAACGGTCTG
ATCACCCGGA GTGCAACCCT GCACGTGCGC ACGGTCTGGC TTGTCGATCC CGACGAGGAG
CGCCTGCACA TCGTTGGTTC ATTTGTGCAG CGCATGGTTC GTCACGCCGG CGCAGGATTT
CAAGTGGAGT TGACCACGGA ACGACGCCGG GCGCTCGAAG GCGCCGATTA TGTCATCACG
CAGTTTCGCG TCGGCGGGCA GCAGGCGCGT CATAACGACG AACTGCTCGG ACGGCGGCAT
CACCTCGTCG GGCAGGAGAC GACCGGCGTT GGCGGGTTTG CCAAGGCGTT GCGCACTATT
CCCATTGTGC TCGATGTTGC GCGTGATATG CGTGCGAACG CACCGCAGGC GATTCTGCTC
AATTTCACCA ATCCGGCTGG CATCGTCACC GAGGCGGTAG CGCGTCACGG CGGCGTGCCG
GTCATTGGGC TGTGCAACAA TGCGATCAAT GCGCAGCGCG GCATTGCGCG CATGTGCGAT
GTGCCGCCGG AACAGGTGTT CATCGAGCAG GTTGGACTGA ACCACCTGAA CTGGATCCGG
CGGGTGACGA TCAATGGCGA GGACGCGACC AACGCCGTGA TCGCGGCGTA TGTCGAGCGT
CTGCGCCACG ATGACGATCC GCTCCGTTTT CCACCCCGGC TCATTCACAT ACTGCGCGCC
ATTCCGTCGT CATATCTGCG CTATTTCTAT CTTACGCCGC AGATCATTGC GCGGCAGAAC
AGCGGCGAGC CGACCCGCGC CGAAGTGGTG ATGGAAGTCG AGCGCCGACT GCTTGCGCGC
TACGCCGACC CGACGCTGCG TGAGATGCCG CCGGAACTGA TGGAACGCGG CGGCGCGTAC
TACTCGACGG CGGCTGCGGC GCTGATCGAA TCGCTCTATA CCGACGACAA CGCCATTCAC
GTGGTGAATA CGCGCAACAA TGGCGCTATC CCCAACCTCG CCGACGATGT GGTCGTTGAA
ATGCCATGTG CGGTTGGGAA ATGCGGCGCC ACGCCCATTC CCGTTGCTCC GCTCGAGCCA
GCCTTCCACG GGCTGACCTG CCAGGTGAAA GCCTATGAAC TGCTCACCGT GCAGGCAGCC
GTCGAGGGGA ACGAAGAAGC AGCGATGCTG GCGTTACTTG CCAACCCGCT CGGTCCCGAC
GCGGCACACG TTGAAGCCGT TTGGGAGGAC ATCAAACGAA CGAATCGCGG TCTGCTTCCC
ACTTTCGAGA GGTAA
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| Protein sequence | MNIVVIGGGS TYTPELINGL ITRSATLHVR TVWLVDPDEE RLHIVGSFVQ RMVRHAGAGF
QVELTTERRR ALEGADYVIT QFRVGGQQAR HNDELLGRRH HLVGQETTGV GGFAKALRTI
PIVLDVARDM RANAPQAILL NFTNPAGIVT EAVARHGGVP VIGLCNNAIN AQRGIARMCD
VPPEQVFIEQ VGLNHLNWIR RVTINGEDAT NAVIAAYVER LRHDDDPLRF PPRLIHILRA
IPSSYLRYFY LTPQIIARQN SGEPTRAEVV MEVERRLLAR YADPTLREMP PELMERGGAY
YSTAAAALIE SLYTDDNAIH VVNTRNNGAI PNLADDVVVE MPCAVGKCGA TPIPVAPLEP
AFHGLTCQVK AYELLTVQAA VEGNEEAAML ALLANPLGPD AAHVEAVWED IKRTNRGLLP
TFER
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