Gene Rcas_1369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1369 
Symbol 
ID5538841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1751294 
End bp1751737 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content61% 
IMG OID640893506 
Producthypothetical protein 
Protein accessionYP_001431483 
Protein GI156741354 
COG category[C] Energy production and conversion 
COG ID[COG0680] Ni,Fe-hydrogenase maturation factor 
TIGRFAM ID[TIGR00072] hydrogenase maturation protease 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTCCT CACATATCCT CATCATTGGC TATGGCAACG ACCTGCGCGG CGACGATGCG 
GCCGGTCGCG TGGCGGCGGA GCGACTTGCT GCGCTCCAAC TGCCCGATAC GCAGGTTCTC
TCCGTGCACC AGTTAGTGCC GGAACATGCG GCGCTTCTGG CGCAGGCGCA GATGGCTATC
TTTATCGATG CCGACCTGGA CGATTGCCCG ATTGTGCGGG TGACTCATCT GACGTCGGGC
GCCAGTTGGA GCGTGATTGG GCATACTGCC ACTCCCGAAG GGTTGCTGGC CCTCACCGCT
GCCGTGTATG GTCAGGCGCC GAATGGCTGG CTCATCCGTA TCCCGGCAAT CCATTCCGTT
TTCGGTGCGC CTCTCTCCCG TCGGGCAGAA GACGGCGTTG CCGAAGCAGT TGAGATCGTC
CGGCATCTTA TCTCCAAGAG ATGA
 
Protein sequence
MRSSHILIIG YGNDLRGDDA AGRVAAERLA ALQLPDTQVL SVHQLVPEHA ALLAQAQMAI 
FIDADLDDCP IVRVTHLTSG ASWSVIGHTA TPEGLLALTA AVYGQAPNGW LIRIPAIHSV
FGAPLSRRAE DGVAEAVEIV RHLISKR