| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1365 |
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| Symbol | |
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| ID | 5538837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1746535 |
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| End bp | 1748133 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640893502 |
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| Product | NADH dehydrogenase (quinone) |
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| Protein accession | YP_001431479 |
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| Protein GI | 156741350 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.529964 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATAA GCGAACTTCT CACCATTGCC GAACACGAAC GCACTATGCG GCGACCGACC
TGTATTCGCT GCTGCACAGC GCTCGGATGT CAGTCGGCGG GGTCACTTTC GCTGAAGCAG
CGGCTCGAAG AAGCGGTTGC CGAAGTGGAT CGCACCGATA TCGAGGTGAT CGGCGTCGGA
TGCATGGGGA TGTGCGGTCA TGGTCCACTC GTGCGCGTCG ATCCCGATGG GGTGCTCTAC
GAGCATGTGC ACGCTGCTGA TGCACCATCG ATTGTCGCGG CGCTCGATGG CGGCGATGCG
ACGGCGCCGC GAGGCGATCC ACAGCACCCC TTCTTTACCT TGCAGAAACG GATCGTCCTG
GAAAACAGCG GCATTATCGA CCCGGAACGC ATCGAGTCAT ACATCGCGGC AGGCGGGTAT
CAGGCGCTCT ACTGCGTGCT GCACGATATG ACTCCGGCAG AAGTGATCGA TGTCGTCACC
CGCAGCGGTC TGCGCGGGCG CGGCGGCGCC GGGTATCCGA CCGGGCTGAA GTGGGCGACC
GTCGCCAAGA GTCACGGCGA TCGCAAGTAT GTCGTCTGCA ACGCCGACGA AGGCGACCCC
GGCGCGTTCA TGGATCGCAG CATCATCGAG AGTGACCCGC ACAAAATCCT CGAAGGCATG
GCAATCGCCG CGTATGCCGT GGGCGCCGAT CAGGGGTACG TCTATGTGCG TGCTGAGTAT
CCACTGGCGA TTCAGCGTCT GCAACGAGCA ATTGCGCAGG CGCGGCGGCT TGGGCTGCTC
GGCGCGCAGA TTTTCGATGC CGGGTTTACC TTCCGCATCG ATATTCGCGT CGGCGCCGGG
GCATTCGTGT GCGGTGAAGA AACAGCGCTC ATGGCGTCGA TCGAAGGCCG GCGCGGTCAA
CCGCGTCCCC GTCCGCCCTA CCCTGCCGAA AGCGGGCTGT GGGGCAGACC AACGCTCATC
AACAATGTCG AAACCTTTGC CAACATCCCG CCGATCATTC GTAATGGAGC GGAATGGTTT
GCTGCGATCG GTGCAGAGCA TAGCAAGGGT ACGAAAGTGT TCGCCCTGAC CGGCAAAATT
CGCCATACCG GTTTGATCGA AGTGCCGATG GGGGTCACGC TGCGCCAGAT CGTCGAAGAG
ATGGGTGGTG GCGTGCCCGA AGGCAGGGTC AAGGCAGTGC AAACAGGTGG ACCATCCGGC
GGATGTATTC CTGCTGCGTT GCTCGATACG CCGGTTGACT ATGAATCGTT GCAGCGCGTC
GGCTCGATCA TGGGATCAGG CGGTATGGTG GTTATGGACG ACGCGACCAA TATGGTCGAT
GTTGCCCACT TTTACATGGA GTTCTGCAAG GACGAGTCGT GCGGCAAGTG TATTCCATGC
CGTGCAGGTA CTGCGCAAAT GCTGCATATG CTCAATCTCA TCCGATCCGG TCAGGCGACC
GCTGCCGACC TTGCGCGGCT TGAGCAACTT TGCATAATGG TGAAGGAAAC CAGTCTCTGT
GGCCTCGGTC AGTCGGCGCC AAATCCGGTG TTGAGCACAA TGAAATACTT TCGTGAAGAG
TATGAAGCGT TCGTCCGGGA TGAGGGGTTA GCGGGTTAG
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| Protein sequence | MDISELLTIA EHERTMRRPT CIRCCTALGC QSAGSLSLKQ RLEEAVAEVD RTDIEVIGVG
CMGMCGHGPL VRVDPDGVLY EHVHAADAPS IVAALDGGDA TAPRGDPQHP FFTLQKRIVL
ENSGIIDPER IESYIAAGGY QALYCVLHDM TPAEVIDVVT RSGLRGRGGA GYPTGLKWAT
VAKSHGDRKY VVCNADEGDP GAFMDRSIIE SDPHKILEGM AIAAYAVGAD QGYVYVRAEY
PLAIQRLQRA IAQARRLGLL GAQIFDAGFT FRIDIRVGAG AFVCGEETAL MASIEGRRGQ
PRPRPPYPAE SGLWGRPTLI NNVETFANIP PIIRNGAEWF AAIGAEHSKG TKVFALTGKI
RHTGLIEVPM GVTLRQIVEE MGGGVPEGRV KAVQTGGPSG GCIPAALLDT PVDYESLQRV
GSIMGSGGMV VMDDATNMVD VAHFYMEFCK DESCGKCIPC RAGTAQMLHM LNLIRSGQAT
AADLARLEQL CIMVKETSLC GLGQSAPNPV LSTMKYFREE YEAFVRDEGL AG
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