| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1357 |
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| Symbol | |
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| ID | 5538829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1736248 |
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| End bp | 1736955 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640893494 |
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| Product | sortase family protein |
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| Protein accession | YP_001431471 |
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| Protein GI | 156741342 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3764] Sortase (surface protein transpeptidase) |
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| TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGGTA TTCCTGTGTT TCATTATCGC TATCGCCCGT TCCTGACGGT GATCGCAGCG
ATTGCGCTCA TCCTGCTGGG TATTGGTGCG GTCTATCTGG TCTGGATGAA CATGCTGCGC
GATCAGGAAC GGCTCAATCC TTCTACCGAG CGTGTGCTGG TTACCACCGA CGGTCAGCGC
ATTCCACTGG ACCGCTCCAG CCCGACGGTC GCCGCCACGG CGGGAGCCGG ATCCGGTGCG
ACAACCAGCC CACAGATCAC GCCGGAAGCG TCTGCCACGC CAATGCCGGC GACCGACCCG
CTTCCACCAG AACGCCTGAT CATTCCGCGC ATCAATGTCA ACTGGCCCGT GACCCTGGCA
GACATCGATC ATTTGCCGAA GTTCCGCGGC GTCGGCTGGA TATTCGGCAC CGGCTTCCCC
GGCATGCAAG GAAACATGGT GTTGACCGGA CATATGGGCG GACCCTACGC GACTTTTGAA
CGTCTGCACG AAGTGCAGCC GGGCGATGAA ATTCTGGTTC AGACTGAGTC GGACATGCAT
CGCTACCGCG TGCAAACAGT CTACGAAACA ACACCCGACG ATGTGCGAGC GATGGCGCCT
GACGACCGGA TGATCGCCAC CCTTATCACC TGTAGCGGCG ACTGGATCCC CGAACAACAG
ACAAATGCGC GACGATTGAT CGTGGTTGCT GTGTATGAAG GGAGATGA
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| Protein sequence | MSGIPVFHYR YRPFLTVIAA IALILLGIGA VYLVWMNMLR DQERLNPSTE RVLVTTDGQR
IPLDRSSPTV AATAGAGSGA TTSPQITPEA SATPMPATDP LPPERLIIPR INVNWPVTLA
DIDHLPKFRG VGWIFGTGFP GMQGNMVLTG HMGGPYATFE RLHEVQPGDE ILVQTESDMH
RYRVQTVYET TPDDVRAMAP DDRMIATLIT CSGDWIPEQQ TNARRLIVVA VYEGR
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