| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1356 |
|---|
| Symbol | |
|---|
| ID | 5538828 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 1735247 |
|---|
| End bp | 1736095 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640893493 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_001431470 |
|---|
| Protein GI | 156741341 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4585] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGTAG CGTGGTTTAT TCGAGTACGA CAACACAGCA CGACCATGAA ACATCAACTT
ACGACCCTCA TCCCCGAAAC CAAACGACAC ACCTCATTTC CGTTCGATCG AGCACAAACC
GCACCCGAAC ACTGGCGCAA GGAGCGCGAG CAGTTGTTGC TCCTTCTTGC CGAGCGCGAG
GCGGAGATCC ATCTGCTGCG CCGTATGGTA TTCGAGGCGC AACGCGCCGG GCAGCGCCGG
ATCGCTCGTG AGTTGCACGA TGGCGTGGCG CAGCAGATCA CAGCCGCCTG CCTGCACCTT
CAGGCGTTGG CCGGCAGATA TCGTCCACGG TCGCCCAAAG CACGTGCAAC GCTCGAGCGG
GCCATCGAAC TGACCCGCAG CGCCGCCGAT GAGGTGCGCC GGGTGATCGC CGATGCGCCG
CCTGCGGCGC TCGAGACCCA TCGCCTGGCA GAAGCGATTT GCAGCGAAGC GATGGCGTTA
CAACGCGATG GATGGCGGGT GACGACCCGA ATTGCCGATG TTGGTCGGTT ACCAGAGGAT
GTCGAACTGG CACTGTTTCG CATCGCTCAA GAAGCGCTCC AGAACATTCG ACGGCACGCG
GGACGCTGCC GGGTACAGGT GACGCTGGCG CGCGAGGGAG CGTGTGTGCG GCTGGAGATT
GTCGATAACG GGTGTGGCTT CGATCCGCAG CAGACCGCCG CAGGGCGCTT TGGTCTGGCG
GGTATGCAGG AGCGCGCAGC ATTGTTGGGG GGAACCGTGA TCATCCAGAG TCATCCTGGC
TGCGGGACAC GGATCGCGAT CCGTATTGAT ATGGAAACTG ATGATGAAAC ACGGATGTGG
ACGAATTGA
|
|---|
| Protein sequence | MIVAWFIRVR QHSTTMKHQL TTLIPETKRH TSFPFDRAQT APEHWRKERE QLLLLLAERE
AEIHLLRRMV FEAQRAGQRR IARELHDGVA QQITAACLHL QALAGRYRPR SPKARATLER
AIELTRSAAD EVRRVIADAP PAALETHRLA EAICSEAMAL QRDGWRVTTR IADVGRLPED
VELALFRIAQ EALQNIRRHA GRCRVQVTLA REGACVRLEI VDNGCGFDPQ QTAAGRFGLA
GMQERAALLG GTVIIQSHPG CGTRIAIRID METDDETRMW TN
|
|---|
| |