Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1344 |
Symbol | |
ID | 5538816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 1721849 |
End bp | 1722529 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640893481 |
Product | hexapaptide repeat-containing transferase |
Protein accession | YP_001431458 |
Protein GI | 156741329 |
COG category | [R] General function prediction only |
COG ID | [COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily |
TIGRFAM ID | [TIGR03570] sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.966213 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCGTG TTCTGATCAT TGGCGCCGGC GGGCATGCGC AGGTGGTCGC CGACATTCTG CTGCGCATGC ACGAGATGGG CGCCGACCTG ACACCGATTG GTTTTCTCGA CGATAATCCA CATTTGTTCG GTGAGTGGCG ACTCGGATTG CCGATCCTGG GTCCGCTTGC CTCTATCGAT GCCGTCGATC ACGACTGCGT CGTGATCGGC ATTGGCGACA ATCGGACGCG CCGGGCGATC TACGAACGTC TGACAGCGTG CGGCGAGCAG TTCACTGTGG CATGTCACCC GACAGCGATC GTCGCACGCG ACGCGGTTAT TGGTGCGGGG ACGGTCATCG CGGCGCGGGC AGTCGTGAAC GCTGGAGCAC ATATTGGCAT GAATGTCATC CTCAACAGCG GTTGCATTGT CGAACACCAC AATCGCATCG GCGCCCATGC TCACATTGCG CCAGGCGCAA CCCTTGGCGG CGCCGTGACT GTCAGCGAAG GGGCGCTGGT GGGCATTGGC GCGACAGTGC TGCCGCAGCG CGCGGTCGGT GCGTGGAGTG TGGTCGGCGG TGGCGCAGTG GTAACATCGG CAGTGGACGA TAACCAGGTA GTCAGCGGCG TCCCTGCGCG TCCACACCTG GCGTCGCACC ATCTGATCCC GGCGCGACGT CGCGCGCGTG TCGGGGTGTG A
|
Protein sequence | MKRVLIIGAG GHAQVVADIL LRMHEMGADL TPIGFLDDNP HLFGEWRLGL PILGPLASID AVDHDCVVIG IGDNRTRRAI YERLTACGEQ FTVACHPTAI VARDAVIGAG TVIAARAVVN AGAHIGMNVI LNSGCIVEHH NRIGAHAHIA PGATLGGAVT VSEGALVGIG ATVLPQRAVG AWSVVGGGAV VTSAVDDNQV VSGVPARPHL ASHHLIPARR RARVGV
|
| |