Gene Rcas_1339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1339 
Symbol 
ID5538811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1717106 
End bp1717822 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content64% 
IMG OID640893476 
Productmetallophosphoesterase 
Protein accessionYP_001431453 
Protein GI156741324 
COG category[R] General function prediction only 
COG ID[COG1407] Predicted ICC-like phosphoesterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGACG ATCAGACCGT TTCCCCCCCA AGCCTTATCA TCGCCGGGGA AGAGGTGCAG 
TTGCTCACGG AGCGCGCGCT TTTCTGGCAG CGCACTGCAA CCCTGATCAT TGCCGACCCG
CACATCGGCA AAGCCAGCGC GTTCCGCGCA GCAGCGGTCG CCGTGCCCGA AGACACGACC
CATGCCGACC TGGATCGCCT CAGTCGGCTC ATCGCCAGAT GCAACGCGCA GAAGGTCGTT
ATTTTAGGCG ATCTGTTGCA TGCGCGCAGC GGACGCACTA CTGCGACTCT TGCGGCGGTC
TCAGCGTGGC GAGCGCGTCA TGCCAGTCTC GACCTGATCC TGGTGCGTGG CAATCACGAT
GTACGCGCTG GCGATCCGCC AAGCGCCTGG GATATCGCCT GCCTCGATGA GCCGTGGCAG
ATGCCGCCTT TCATCTTGCG CCATCATCCC GCAGCGCACC CCGATGGGTA CGCGCTTGCC
GGGCACCTTC ATCCTGCTGC CCGATTGATC GGCGCCGGCA GACAACGCGC AACCCTCCCC
TGTTTCTGGT TTGGTGCGCA GGTCGGTGTG CTGCCGGCAT TCGGCAGTTT TACCGGCGCC
ACGCTCATTG CTCCTGAGCG GGACGATCAG GTGTTCGTCA TTGCTGGTGA TGACGTGGTT
GCAGTGTCGG GCGCGTTACG CGGAACGGAG TCAGCGCAGC GGGCAGGACG CCGCTAA
 
Protein sequence
MPDDQTVSPP SLIIAGEEVQ LLTERALFWQ RTATLIIADP HIGKASAFRA AAVAVPEDTT 
HADLDRLSRL IARCNAQKVV ILGDLLHARS GRTTATLAAV SAWRARHASL DLILVRGNHD
VRAGDPPSAW DIACLDEPWQ MPPFILRHHP AAHPDGYALA GHLHPAARLI GAGRQRATLP
CFWFGAQVGV LPAFGSFTGA TLIAPERDDQ VFVIAGDDVV AVSGALRGTE SAQRAGRR