Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1339 |
Symbol | |
ID | 5538811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 1717106 |
End bp | 1717822 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640893476 |
Product | metallophosphoesterase |
Protein accession | YP_001431453 |
Protein GI | 156741324 |
COG category | [R] General function prediction only |
COG ID | [COG1407] Predicted ICC-like phosphoesterases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCAGACG ATCAGACCGT TTCCCCCCCA AGCCTTATCA TCGCCGGGGA AGAGGTGCAG TTGCTCACGG AGCGCGCGCT TTTCTGGCAG CGCACTGCAA CCCTGATCAT TGCCGACCCG CACATCGGCA AAGCCAGCGC GTTCCGCGCA GCAGCGGTCG CCGTGCCCGA AGACACGACC CATGCCGACC TGGATCGCCT CAGTCGGCTC ATCGCCAGAT GCAACGCGCA GAAGGTCGTT ATTTTAGGCG ATCTGTTGCA TGCGCGCAGC GGACGCACTA CTGCGACTCT TGCGGCGGTC TCAGCGTGGC GAGCGCGTCA TGCCAGTCTC GACCTGATCC TGGTGCGTGG CAATCACGAT GTACGCGCTG GCGATCCGCC AAGCGCCTGG GATATCGCCT GCCTCGATGA GCCGTGGCAG ATGCCGCCTT TCATCTTGCG CCATCATCCC GCAGCGCACC CCGATGGGTA CGCGCTTGCC GGGCACCTTC ATCCTGCTGC CCGATTGATC GGCGCCGGCA GACAACGCGC AACCCTCCCC TGTTTCTGGT TTGGTGCGCA GGTCGGTGTG CTGCCGGCAT TCGGCAGTTT TACCGGCGCC ACGCTCATTG CTCCTGAGCG GGACGATCAG GTGTTCGTCA TTGCTGGTGA TGACGTGGTT GCAGTGTCGG GCGCGTTACG CGGAACGGAG TCAGCGCAGC GGGCAGGACG CCGCTAA
|
Protein sequence | MPDDQTVSPP SLIIAGEEVQ LLTERALFWQ RTATLIIADP HIGKASAFRA AAVAVPEDTT HADLDRLSRL IARCNAQKVV ILGDLLHARS GRTTATLAAV SAWRARHASL DLILVRGNHD VRAGDPPSAW DIACLDEPWQ MPPFILRHHP AAHPDGYALA GHLHPAARLI GAGRQRATLP CFWFGAQVGV LPAFGSFTGA TLIAPERDDQ VFVIAGDDVV AVSGALRGTE SAQRAGRR
|
| |