Gene Rcas_1323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1323 
Symbol 
ID5538795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1703124 
End bp1703627 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content61% 
IMG OID640893460 
ProductNADH dehydrogenase subunit B 
Protein accessionYP_001431437 
Protein GI156741308 
COG category[C] Energy production and conversion 
COG ID[COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases 
TIGRFAM ID[TIGR01957] NADH-quinone oxidoreductase, B subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAATAG AGCAGAAGGC AGGCGATATG GGGATTGTCA CCGCCTCGCT CGAGCAGGTG 
GTGAACTGGA GCCGCTCTAA TGCCATGTGG CCCCTATTGT TCGGGCTGGC ATGCTGCGCC
ATCGAAATGA TGGGCGCGCA GGGCGCCAAT TATGACCTGT CGCGCTTTGG CATGGAGATT
AACCGCGCAT CGCCGCGCCA GGCGGATCTG ATGATCGTCG CGGGGCGCGT GTCGCGCAAG
ATGGCGCCAG TGGTGCGCCG CCTCTACGAT CAGATGGCGG ACCCAAAGTG GGTGATTGCT
ATGGGCGATT GTGCTGCATG CGGCGGGGTG TTCAACAACT ATGCAATTGT GCAGGGGGTC
GATGAGATTG TGCCGGTCGA TGTGTATGTC GCCGGGTGCC CGCCGCGCCC CGAGGCGCTG
ATCGATGGGA TCATTCATCT GCACGAGAAA GTCCGGCGTA TGCGGCTCGA TGGCACACTG
CGCGAACCGG TTCATCTGTC GTAA
 
Protein sequence
MGIEQKAGDM GIVTASLEQV VNWSRSNAMW PLLFGLACCA IEMMGAQGAN YDLSRFGMEI 
NRASPRQADL MIVAGRVSRK MAPVVRRLYD QMADPKWVIA MGDCAACGGV FNNYAIVQGV
DEIVPVDVYV AGCPPRPEAL IDGIIHLHEK VRRMRLDGTL REPVHLS