| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1321 |
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| Symbol | |
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| ID | 5538793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1701264 |
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| End bp | 1702517 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640893458 |
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| Product | NADH dehydrogenase I, D subunit |
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| Protein accession | YP_001431435 |
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| Protein GI | 156741306 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
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| TIGRFAM ID | [TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.735553 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTTG CAGAAACCCG TGCGCGCAAT CTGAGCATCC CCGCTCCCAG CCAGATTACC
CGTCCGGCGC TCGAAGGGGT GAAAGAGACC ATGGTTCTGA ACATGGGTCC GCATCACCCC
AGCACCCACG GCGTGCTGCG GCTGGTCGTC GAACTCGATG GCGAGACAGT CGTTGATGTT
GCGCCCGACA TTGGCTACCT CCATACCGGC ATCGAAAAAA CGATGGAGAG TAAAACGTAT
CAGAAAGCGG TCGTGTTGAC CGACCGCACG GATTATCTGG CGCCGCTCTC CAACAATCTG
AGTTATGTGC TGGCGGTCGA GAAACTGCTC GGATGCGAGG TTCCAGAGCG CGCCACCGTT
GCGCGGGTGC TGCTGGTCGA ACTGCAACGC ATCGCCAGCC ATCTGGTGTG GCTCGGCACG
CACGCGCTCG ACCTGGCAGC CATGAGTGTG TTCCTCTATG GCTTCCGCGA ACGCGAACAA
ATTCTCGATA TTTTTGAACT GGTCTCGGGC GCGCGCATGA TGACCAGTTA TTTCCGCGTC
GGCGGGCTGG CGTATGACCT GCCAATCGAG TTCGATGCCG CTGTCGAGGC ATTCCTTGCG
ATCATGCCGG GGCGCATCGA TGAGTACGAA GCGCTGCTGA CCGATAATCC GCTCTGGATC
GAGCGCACGC AGGGCATTGG CGCCATCGAT AGCGAGGCCG CCATTGCGCT GGGGCTGACC
GGACCTGGAC TGCGCGCGAC TGGCGTGGCG TGGGACTTGC GCAAAACCAT GCCCTACTGC
GGCTATGAGA CCTACTCCTT CGCCGTTCCG ACCGCCACCC ATGGCGATAT TTATGACCGC
TATCTGGTGC GCATGGCGGA AATGCGCGAA AGTGTCTCGA TCTGTCGCCA GGCGTTGCAA
CGGTTGCGCG ACATCGGTCC TGGACCGTAT ATGACGCTGG ATCGCAAGAT TGCGCCGCCG
CCGAAGAGCG AAATTACGCA GAGCATGGAG GCGCTCATTC ACCATTTTAA GTTGTGGACC
GAGGGCTTTA AGCCGCCGCG CGGCGATGCG CTGGCGGCGG TGGAGTCGCC TCGCGGCGAA
TTGGCAACCT ACATCGTGAG CGATGGCAGC GCCAAACCGT ATCGGGTCCA TTTCCGCGCG
CCTTCGTTTG TCAATCTGCA ATCGCTGCCG CACATGGCAC GTGGGCATCT GGTCGCCGAT
CTGGTGGCGC TGATTGCCTC GCTCGACCCG GTGCTCGGAG AAGTTGATCG CTAA
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| Protein sequence | MTVAETRARN LSIPAPSQIT RPALEGVKET MVLNMGPHHP STHGVLRLVV ELDGETVVDV
APDIGYLHTG IEKTMESKTY QKAVVLTDRT DYLAPLSNNL SYVLAVEKLL GCEVPERATV
ARVLLVELQR IASHLVWLGT HALDLAAMSV FLYGFREREQ ILDIFELVSG ARMMTSYFRV
GGLAYDLPIE FDAAVEAFLA IMPGRIDEYE ALLTDNPLWI ERTQGIGAID SEAAIALGLT
GPGLRATGVA WDLRKTMPYC GYETYSFAVP TATHGDIYDR YLVRMAEMRE SVSICRQALQ
RLRDIGPGPY MTLDRKIAPP PKSEITQSME ALIHHFKLWT EGFKPPRGDA LAAVESPRGE
LATYIVSDGS AKPYRVHFRA PSFVNLQSLP HMARGHLVAD LVALIASLDP VLGEVDR
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