| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1304 |
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| Symbol | |
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| ID | 5538776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1682693 |
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| End bp | 1683949 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640893442 |
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| Product | nuclease SbcCD, D subunit |
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| Protein accession | YP_001431419 |
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| Protein GI | 156741290 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0420] DNA repair exonuclease |
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| TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.611964 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.601138 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTGC TTCATCTGGC AGACCTGCAC ATTGGCATCG AAAATTATGG TCGCGTTGAT
CCATCTACCG GCTTGCACAG CCGTCTGCGC GACTACCTGG AGCGCCTGGA TGAGGCGATT
GACGTAGGAC TTGCCGAAGG CGTAGATGCG GTCCTTATCG CCGGTGATGT GTACAAGAAC
CGCACCCCCA ATCCCACACA GCAACGCGAG TTTGCGCGGC GCATCCATCG CCTGCGGGCG
TGCGGTCTGC CGGTCTTTAT CCTCATCGGC AACCATGATG TGTCGCCTGC CGCCGGACGC
GCACACGCCG TCGAAATCTT CGATACGCTG GCGGTCGATG GGGTGACGAT CGCCGATCGA
CCGCGCATCC ATACGCTACA GACACGATCC GGTCCACTTC AGGTCATTGC GCTTCCTTGG
GTGACGCGCC ACGCCCTGCT GACGAAAGAG GAATTGCGCA TGGCGTCGTT CCTGGAAATT
GAAACGATGC TGATCGAGCG GGTAGAACGC TTTCTGCGCC AGGCTGCCGA CGACCTTGAT
CCGGCGCTGC CGGCAGTGTT GACCGTGCAC GGCACGATTG ACGGCGCCAC GTTCGGCGCC
GAACGGCAGG TGCTGCTCGG GCGCGACCTG ATCTATCCGC GCAGCCTGAT GGCGCTGCCG
AACGTCGATT ATGTGGCGAT GGGGCATATC CACCGTCATC AGGCGCTTGG CGACCATCCG
CCCGTCGTCT ACCCCGGAAG CATCGAGCGG ATCGATTTTG GCGAGGAGGA CGAAGACAAG
GGATGTGTCA TCGTTGATCT GAAGGCGAAG GGTGAGGCGC ATTGGCGTTT TCACAAACTG
GCGGCGCGTC CATTCGTCAC AATTGCGGTC GATGTGCGCA GTATAAACGA CCCGATGCAG
CGCGTGCTGG CTGCCATCGA GCGGCGCTCG CTGCGCGGCG CAGTGGTGCG GGTGAAGATC
GACGCGCGTC CCGAACAGGC GGATGCGCTT CAGACTGAGG CGATCCGGCG TGCGCTCGAC
GATGCCGGCG CCTATGTCAT CGCTGCCGTG ACGGTCGAGG TCGAACGGAG CACCCGCGGA
CGGTTGGGAA ATAGTGACGC AAGCATCCTC GACGGATTGA CCCCGCGCCG CGCACTGGAA
TTGTACTTGC GCCAGAAAAC ACCGCCGCTC TCGGAAGAAC GTATCGCCGC GCTCCTCGCC
GCTGCCGATG AACTGCTGGC AGAAGGCGCT CAGGATCGCG TGGAACTGTT GTCCTGA
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| Protein sequence | MRLLHLADLH IGIENYGRVD PSTGLHSRLR DYLERLDEAI DVGLAEGVDA VLIAGDVYKN
RTPNPTQQRE FARRIHRLRA CGLPVFILIG NHDVSPAAGR AHAVEIFDTL AVDGVTIADR
PRIHTLQTRS GPLQVIALPW VTRHALLTKE ELRMASFLEI ETMLIERVER FLRQAADDLD
PALPAVLTVH GTIDGATFGA ERQVLLGRDL IYPRSLMALP NVDYVAMGHI HRHQALGDHP
PVVYPGSIER IDFGEEDEDK GCVIVDLKAK GEAHWRFHKL AARPFVTIAV DVRSINDPMQ
RVLAAIERRS LRGAVVRVKI DARPEQADAL QTEAIRRALD DAGAYVIAAV TVEVERSTRG
RLGNSDASIL DGLTPRRALE LYLRQKTPPL SEERIAALLA AADELLAEGA QDRVELLS
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