| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1303 |
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| Symbol | |
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| ID | 5538775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1680284 |
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| End bp | 1681291 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640893441 |
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| Product | luciferase family protein |
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| Protein accession | YP_001431418 |
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| Protein GI | 156741289 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR03560] probable F420-dependent oxidoreductase, Rv1855c family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.520917 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.367866 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAAC CGGAGAGTTG GAAAGGAAGT TCAGCCCCTA TGATCCGTTT TGGAACCTTC
GTCCCACAAG GATGGCGACT CGACCTGATC GAAATCGACG ACCCGATCAC CAAATACGAG
GCGATGACCG CCGTTGCAAA GACCGCCGAT GCGCTGCCGA TCTACGATTC GATCTGGGTC
TACGACCACT TTCATACCGT GCCGAGGATT GAGCAGGAAG CCGTCTTCGA GTGCTGGACG
ATCACAGCGG CGCTGGCGCG CGACACGCAG CGCGTTCACA TCGGGCAGAT GGTGACGTGT
GTCGGATACC GCAATCCGGC GCTGCTGGCG AAAATTGCCT CGACCGTCGA TGTGCTCAGC
CACGGTCGAC TCTACTGCGG CATCGGCGCC GGATGGTACG AGCACGAATG GCGCGCCTAC
GGCTATGGTT TCCCCGAAAC CCGCGACCGC ATGCGCGCCT TCCGCGAGGC GACAACGATC
ATTGTCAAAA TGTGGACGGA AACGATGCCG ACGTTCGAAG GAGCATACTA CCGCATCGCT
GGTCCGATCA ACGAGCCGCG CGGTGTGCAG AAGCCGCATC CCTCACTCTG GATCGGCGGC
AGCGGCGAGC AGGTGACTCT GAAACTCGTC GCGCAGTACG GCAACGCCTG TAATATTGGC
GGCTCGCCGG AAACCATCAG TCGCAAGCTG GCAATCCTTC GCGAGCACTG CGAAACGGTT
GGACGCAACT ATGGCGACAT CATCAAATCG AGCAATGTTA ACATCGTGCT GCTCAAACCA
GGCGCCGACA TTGCCGCCGC CACCGAGAAG GTGCGCGCGA CCTACGGATG GAGCGTCGAC
CAGTTGCTTC AAAATGCCAT CGTCGGCACG AGCGAAGAGG TTGTCGAACG CTTGCAGGCG
CTCGCGGACG TAGGGATTGA CTACCTTATC ACATACTTTC CGCGCGTCGC TTACGACCAC
ACGCCGCTCT ATCAGTTCGC CGAGGAGGTC GCGCCACACA TCCGTTGA
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| Protein sequence | MAEPESWKGS SAPMIRFGTF VPQGWRLDLI EIDDPITKYE AMTAVAKTAD ALPIYDSIWV
YDHFHTVPRI EQEAVFECWT ITAALARDTQ RVHIGQMVTC VGYRNPALLA KIASTVDVLS
HGRLYCGIGA GWYEHEWRAY GYGFPETRDR MRAFREATTI IVKMWTETMP TFEGAYYRIA
GPINEPRGVQ KPHPSLWIGG SGEQVTLKLV AQYGNACNIG GSPETISRKL AILREHCETV
GRNYGDIIKS SNVNIVLLKP GADIAAATEK VRATYGWSVD QLLQNAIVGT SEEVVERLQA
LADVGIDYLI TYFPRVAYDH TPLYQFAEEV APHIR
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