Gene Rcas_1283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1283 
Symbol 
ID5538755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1655812 
End bp1656309 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content50% 
IMG OID640893421 
Producthypothetical protein 
Protein accessionYP_001431398 
Protein GI156741269 
COG category[S] Function unknown 
COG ID[COG1666] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.252037 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCTG AAAGCACATT CGATATTGTC TCCGATTTCG AGCGTCAGGA ATTGGTCAAC 
GCCATTGATC AGGCGCGGCG TGAGGTTGCC ACGCGATATG ATTTGAAAGA CACTAAAACC
GAGATTGTTT TGAGTGAGAA GGAACTGACC ATAACGACCG AATCGGAGAT GCATCTTGCC
GCAGTGCGCG ATCTGGTTCA GACGAAAGCG CTGCGGCGCA ATCTTTCGAT TAAGATCTTT
AAGTTCGGTC CGGTTCAGGA AGTGAGCGGC GGTCGGGTGC GGCAGGTTGC AACATTACAG
CGCGGCATTC CTGAAGATGT GGCAAAAAAA TTGGCGAAAC TCATTCGCGA TCATTTTCCG
AAAGTGCAAC CGCGTATTCA GGGGGATGCC TTGCGCGTTG GGAGCAAAAG TCGTGATGAG
TTGCAGGCGG TGATTCGTCT GGTGAAAGAA CGTCAGGATG AATTTGATAT TCCGCTTCAG
TTTACCAACT ATCGTTGA
 
Protein sequence
MPAESTFDIV SDFERQELVN AIDQARREVA TRYDLKDTKT EIVLSEKELT ITTESEMHLA 
AVRDLVQTKA LRRNLSIKIF KFGPVQEVSG GRVRQVATLQ RGIPEDVAKK LAKLIRDHFP
KVQPRIQGDA LRVGSKSRDE LQAVIRLVKE RQDEFDIPLQ FTNYR