| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1278 |
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| Symbol | |
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| ID | 5538750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1648778 |
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| End bp | 1649881 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640893416 |
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| Product | ABC transporter related |
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| Protein accession | YP_001431393 |
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| Protein GI | 156741264 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.288826 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.201338 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCCA TTAAGTACGA CCACGTTTGG AAGCGTTTTG GCGATTTCGC GGCGCTCAAG
GACCTCACCC TCGATATCGC CGACCAGGAG TTCCTGGTGC TTGTGGGACC GTCGGGGTGC
GGCAAGACGA CTGCGCTGCG CTGCCTCGCT GGCCTGGAAG AGGTGACGGA CGGTGCGATT
ATGATCGGCG ATCGGGTCGT GAATGATGTT CCGCCGAAGG ACCGCGACAT TGCAATGGTG
TTCCAGAGTT ATGCGCTCTA CCCCCATATG AGCGTGTACG ACAATATGGC ATTTGGCTTG
AAGCTGCGCA AAACGCCGAA AGCCGAAATT GACCGACGGG TCAAGGAGGC GGCGGAAATG
CTGCACATCG GGCATCTCCT GGATCGCAAG CCCAAGGCGC TCTCCGGCGG TCAGCGCCAG
CGCGTGGCGC TTGGGCGCGC AATTGTGCGA CATCCGTCGG TCTTCCTGAT GGACGAGCCG
TTGTCGAACC TCGATGCCAA ACTGCGCGTG CAGACGCGCG CGGAGATTTC AAAACTGCAT
CAGCGCCTGA AAACGACGTT TATCTATGTG ACCCACGATC AGACCGAAGC CATGACGATG
GGAACGCGCA TCGCCGTGAT GCGCGATGGT GTGTTGCAGC AGCTCGATAC GCCGCAGAAC
CTGTATGACC ATCCGGCGAA TATGTTCGTT GCCGGTTTTA TCGGATCGCC GTCGATGAAC
TTCTTCGAGG CGACGCTGGT GCGCGGCGAT GGGCAGGTGC TGGTCGATTT CGGTCCGTTC
CAATTGCCGG TTCCTCCGTC GCGCGTTGAT GCCATCGCCG ACCATATCGG GATGCCGATC
TTCTTCGGTA TTCGCCCCGA AGACATTCAC GACTCGCACT ACGTGCCGCG TGGCGTCGAT
GAGTCGGCTC GCCTGATGAC GGTGGTCAAT GTCGTCGAGC CGCTTGGTTC GGAAGTGTAT
GCGTATGTGG AGAATGGCGG CAGAGAGATG GTTGCGCGTC TCGATCCACG CACGAAGGCT
CGTACCGGCG AAACGTTCGA GGTCATCATC GATATGACCA AGATGCACAT CTTCGACCGC
GACACCGAGA GGGCGCTTAT CTGA
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| Protein sequence | MASIKYDHVW KRFGDFAALK DLTLDIADQE FLVLVGPSGC GKTTALRCLA GLEEVTDGAI
MIGDRVVNDV PPKDRDIAMV FQSYALYPHM SVYDNMAFGL KLRKTPKAEI DRRVKEAAEM
LHIGHLLDRK PKALSGGQRQ RVALGRAIVR HPSVFLMDEP LSNLDAKLRV QTRAEISKLH
QRLKTTFIYV THDQTEAMTM GTRIAVMRDG VLQQLDTPQN LYDHPANMFV AGFIGSPSMN
FFEATLVRGD GQVLVDFGPF QLPVPPSRVD AIADHIGMPI FFGIRPEDIH DSHYVPRGVD
ESARLMTVVN VVEPLGSEVY AYVENGGREM VARLDPRTKA RTGETFEVII DMTKMHIFDR
DTERALI
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