| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1277 |
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| Symbol | |
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| ID | 5538749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1647722 |
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| End bp | 1648756 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640893415 |
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| Product | LacI family transcription regulator |
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| Protein accession | YP_001431392 |
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| Protein GI | 156741263 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0780915 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.320448 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCGA CGATCAAACA GGTTGCGCAG CGTGCCGGCG TATCGGTGGC CACCGTCTCG
TATGTTCTCA ATGGCGCCGG CGTGGTGACC GACGAGACGC GGCGGCGTGT GCTCGACGCC
ATTGCAGAAC TCAACTATCA ACCGCAGTAC GCCGCTCGCA GCATGCGTGG TCGGAGCCAC
ACGCTGGGAG TGACGCTCCC GTCACATCCG GGGCGTCTGG CGGAACCGGC GCTGGCGGAG
GTGTTGTCTG GTCTGGCAGA CGCCGCCGCA GTGCGCGGCT ATTTTCTGCT CCTGGCAACC
GCTGGCGCCG ATCAGGACGA GACGGAGTTG TGTCTGAGTC TGGCGCGCAG CAGGCGCGTC
GACGGTCTGG TATTGCTTGA TATGCTGGTG GATGATCCGC GAGCGCAGGC GCTTGCGGCT
GCCGGTATTC CTCACGTGTG CGCTGGTCCT CCGCCTGCCG GAGTCGATAG CCCTTCGGTT
GTTATTGATA TGCGCGCCGC TGCGGTTGAT GCCGTCCGGC ATCTCCTCAG CCTTGGACAT
CGCCGGATCG GATTGATTCA ACTGCCCTCC GATCTGGCGG TGAGCGAATC GATTGTCGAG
GGATACCGAC AGGCGTTGAC GGATGCAGGA CTGCCGTTCG ACCCAACGCT GGTTGTCGAG
TCGGGTCGAA CCGAAGAAGA TGGCTACCAG GCGATGACTG AGTTACTGGC GACTTCCAGA
GCGCCGACGG CGGTCCTGGC GGGGAGCGAT GAATTGGCAT TCGGTGCGAT GCACGCGCTC
AATGATGCGC GCCTGATCGT CGGGCGCGAC GTGGCGCTGG TCGGACTCGA CGATTTACCG
CTTGCGGCGC ATGTCAATCC GCCGCTGACG GCGGTGCGCC AGCCGCGCCG CGCGCAGGGG
CAACAACTGG CGATTTTGCT GGATGACGCC ATCATGAAGC GAAACGCCAG TTTGCGTATG
GTAACGCTGA GCGCGCGCCT GATCATTCGC AGGTCGAGTG GTTCGGCGTG GCGCGCAGCA
GAGGGAGTGA ATTGA
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| Protein sequence | MKATIKQVAQ RAGVSVATVS YVLNGAGVVT DETRRRVLDA IAELNYQPQY AARSMRGRSH
TLGVTLPSHP GRLAEPALAE VLSGLADAAA VRGYFLLLAT AGADQDETEL CLSLARSRRV
DGLVLLDMLV DDPRAQALAA AGIPHVCAGP PPAGVDSPSV VIDMRAAAVD AVRHLLSLGH
RRIGLIQLPS DLAVSESIVE GYRQALTDAG LPFDPTLVVE SGRTEEDGYQ AMTELLATSR
APTAVLAGSD ELAFGAMHAL NDARLIVGRD VALVGLDDLP LAAHVNPPLT AVRQPRRAQG
QQLAILLDDA IMKRNASLRM VTLSARLIIR RSSGSAWRAA EGVN
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