Gene Rcas_1263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1263 
Symbol 
ID5538735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1633431 
End bp1634441 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content60% 
IMG OID640893401 
Productrod shape-determining protein MreB 
Protein accessionYP_001431378 
Protein GI156741249 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1077] Actin-like ATPase involved in cell morphogenesis 
TIGRFAM ID[TIGR00904] cell shape determining protein, MreB/Mrl family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGA AGATCGGCAT CGACCTGGGC ACCGCCAATG TGCTGGTATA TGTCAAAGGT 
CGCGGCATCG TCCTCTCTGA ACCTTCGGTT GTCGCCATCT CGACAAAAGA TAATCGCATC
AAGGCGGTGG GTGCGGATGC GCTGGCGATG CTCGGACGCG AACCGGAGAG CATCGAGGTG
ATCCGTCCGC TGCGCGATGG CGTGATCGCC GACTACGACA TTACCGAGGC GATGCTGCGC
TATTTCATTC GCAAGGCGAT GGGACCGTTC AGCTTCAGCA AGCCCGATGT GATGGTCTGC
ATCCCGGCCG GTGTCACGAC GGTTGAGATG CGCGCGGTGC GCCAGGCGGC TGAGGCTGCC
GGAGCGCGTC ATGCTTACCT GATCCGCGAG CCGCTGGCAG CAGCGATTGG CGCCAATATT
CCGGTGGCGC AGCCGTCGGG CAACCTGATC ATCGATATTG GCGGCGGCAC AACCGAAGTT
GCGGTCGTTT CGCTGAACGA TATCGTCGTC AGCCATTCGG TGCGTGTCGG CGGCAATAAA
TTCGACGAAA CGATCGCGGC GTATGTCAAA CGCAAGTATA ACGTGCTGAT CGGTGAACGC
ACCGCCGAGA GCATCAAGAT CGAGATCGGC TCCGCACTGC CGCTCGAGCG CCCGCTGTCA
ATGCAGGTGC GTGGACGCGA TCAGGTGGCA GGTCTGCCGC GCACGATTGA GATCGGCTCG
AATGAAATCA CCGATGCCCT CCAGGAACCG CTCGAAGCGG TCATCGACGC TGTGCGTCGC
GTCCTTGCCG AAACACCACC CGAACTATCG TCGGATATCA TCGATAAAGG GATGATCATG
ACCGGCGGCG GTTCGATGTT GCGCCGGATC AATGAACTGC TCACCGATGT AACCGGCGTT
CCCTGCTATG TCGCCGACCA ACCGGCGAAC TGTGTCGCTA TCGGTACGGG CCTGGCGCTC
GAATATATCG ACATCCTGCG CGATAGCCTC AGCGGGGATG ATTTGAATTA G
 
Protein sequence
MAKKIGIDLG TANVLVYVKG RGIVLSEPSV VAISTKDNRI KAVGADALAM LGREPESIEV 
IRPLRDGVIA DYDITEAMLR YFIRKAMGPF SFSKPDVMVC IPAGVTTVEM RAVRQAAEAA
GARHAYLIRE PLAAAIGANI PVAQPSGNLI IDIGGGTTEV AVVSLNDIVV SHSVRVGGNK
FDETIAAYVK RKYNVLIGER TAESIKIEIG SALPLERPLS MQVRGRDQVA GLPRTIEIGS
NEITDALQEP LEAVIDAVRR VLAETPPELS SDIIDKGMIM TGGGSMLRRI NELLTDVTGV
PCYVADQPAN CVAIGTGLAL EYIDILRDSL SGDDLN