Gene Rcas_1256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1256 
Symbol 
ID5538728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1624620 
End bp1625366 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content61% 
IMG OID640893394 
Productxanthine and Co dehydrogenase maturation factor 
Protein accessionYP_001431371 
Protein GI156741242 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1975] Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACACA CAATGACGAT ACTGTACACC ACTCTTAAGG CATGCCTTGC CGCAGAGCAA 
CCGGTCGCCG TTGCGACGAT CATTGATGGA ACAGGGCAGA TCGGCGCTAA GCTGCTGGTG
CGCCCCGGTG AGGCGTTGCT CGGCACGCTG GGCGATTCGA TCCTCAATGA AGCGGTCGAG
CGCGATGCGC TGGCAATGCT GCTGCGCGCC GAAAGCGGCA TTCGCTCCTA CACGGTCGCT
GATGGCGACG TGCAGGTCTT TATCGAAACC TATCCGCCGC CGCCGACCAT GTTTATTGTC
GGTGCGGTGC ATATTGCCAT TCCGCTGGTA ACGTTTGCAA AGACGCTTGG TTTCCGCACC
GTGGTGATTG ATGCGCGCGG CGCCTTTGCC ACTCCTGAGC GGTTCGCCCA TGCCGACGAA
CTGATCCATG CCTGGCCCGA TGAAGTGCTG CCTGGACGCC TGACGAGCAA CAGTTTCGTG
GTGTTGCTGA CCCACGATCC CAAACTGGAC GATCCGGCGC TTAAGGTGGC GCTGCCCTCG
CCAGCGCGCT ATGTCGGGGC GCTGGGCAGC CCCAAGACGC ACGCCAGACG CCTGGAGCGC
CTGCGCGCCG ATGGGGTGCC AGAAGAACAA CTGGCGCGCC TGCATGCGCC AATCGGGTTG
AAGATTGGTT CGGATTCTCC AGAGGAGATT GCCGTCAGTA TTATTGCCGA AGTTGTGGCG
GCTCGCCATG GGTTGACCGG GAGGTAG
 
Protein sequence
MEHTMTILYT TLKACLAAEQ PVAVATIIDG TGQIGAKLLV RPGEALLGTL GDSILNEAVE 
RDALAMLLRA ESGIRSYTVA DGDVQVFIET YPPPPTMFIV GAVHIAIPLV TFAKTLGFRT
VVIDARGAFA TPERFAHADE LIHAWPDEVL PGRLTSNSFV VLLTHDPKLD DPALKVALPS
PARYVGALGS PKTHARRLER LRADGVPEEQ LARLHAPIGL KIGSDSPEEI AVSIIAEVVA
ARHGLTGR