| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1251 |
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| Symbol | |
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| ID | 5538723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1617715 |
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| End bp | 1619538 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640893389 |
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| Product | cyclic nucleotide-binding protein |
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| Protein accession | YP_001431366 |
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| Protein GI | 156741237 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATCAAT TCCATCGCCT CTGGCCCTTT GTGCGGCGCT ACCGTCGCCG GTTGCTGATC
GGCGCGCTGT GCGCCATGGC AGCCACCGCC GTCGCCGCGA TGATTCCGCA GATCGTGCGC
TTTGCCGTCG ATGACCTGAA TACGCGCGGC GTTGTGATCG AGCGGTTGCT CCAGTACGGC
GGATTGCTGT TGCTCGCTGC GCTCGTGGAA GGATTGTTGC GCTATGGACA GCGCACTCAG
ATCATCGGCA CGTCGCACCT GATCGATTTC GATATGCGCG AAGCGCTATT CGCCCGATTG
TTAACGCTCG ATCAGGGATT CTTCACCACA ATGCACACCG GCGACCTCAT GACGCGGGTG
ACGAACGATC TCTCGGCAGT GCGTATGTTC CTTGGTCCTG GCATCAGCAA CCTGCTTGGT
TCGACGCTGC TGCTGCTGAC CGCCGCGACG CTGATGTTTC TCACGAATCC GGCGCTGGCC
GCAATCGTCG TGCTGCTCCT GCCGATGGCG GCAGTGCTGT TCGTCGTCAT CGGCGGACGT
ATGCGCGCGA TCTTCCGCAA GGTGCAGGAT CAGTTCGGTG AGATCTCAAC CCGCGCTCAG
GAGAATTTCA GCGGCATCCG CACGATCAAG GCATATGCCC AGGAAGATGC TGAGATCAGG
GTGTTTCGGC AAGCCAATGA ACGCTACCGC GCGCTCAATC TGCGCTATGT GCTGCTCAGC
GGCATGCTCT GGCCCATCAT TGGGTTGATG CTGGGGACAA TCGGCGCTTT TGTGCTGCTC
ATCGGCGGGC GCATGGTTGC AGCCGGCGAG ATGACCGTTG GTGAACTGGT GTTGTTTAAC
GCCTACCTGG CACAACTCGC ATGGCCCGTT ATCGCTCTTG GGTGGACGGT GGACCTCTAT
CAGCAGGGTG CGGCATCGCT GGTGCGCATT GGCGAGGTGC TTCAACGCCG TTCTGCCATA
GCCTCGCCGC CCGATGCGCC GCGCGATTTC GTGGTGCGGG GAGAGGTCGA GTTTCGCAAT
GTCGGGTTGC GCTTCGCGCA CAGCCAACAT ACGAATGGCA ACGCATCCGG GCATCACGCG
AATGCGCCTT CGACGTCCGG AAAGCCAGCC GCCTCCGGTG CGCCGGAATG GGTGCTGCGC
CATATTTCGT TCCGCATTCC GCAAGGGGGG TCGCTGGGGA TCGTCGGCGC AACCGGCGCC
GGTAAGACGA CCCTGGTCAA CCTGCTGGCG CGGGTGCGCG ACCCGGACGA GGGGCAGGTG
CTGGTTGACG GGTATGATGT GCGCACCCTG CCCCTCGATG CGCTGCGCCG CGGCATCGGC
TATGTGCCGC AGGATACGTT CCTGTTCAGC GTGCCCATCC GCGAAAATGT GACCTTCGGC
AGACCGGACG CGACGGAGGA TCAGATCATC CACGCCCTCG CCGTTTCGCG GCTGATCAAT
GATGTGGAGC AGTTTCCCGA CGGGATCGAC ACCCTGATCG GCGAGCGTGG CGTGACGCTG
TCCGGCGGGC AGAAGCAACG CACTGCCATT GCCCGCGCCA TCCTGCGCGA CCCGGCAATC
TTGATTCTCG ACGATGCGCT TTCGAGTGTC GATACCCACA CTGCCGCCGA GATTCTTGCC
AGCCTGCGCG CGATGATGAA GGGGCGCACC AGCATGATTA TTGCACAGCG CATCGCGACG
GTGAAAGACG CCGATCAGAT CATCGTGCTG CACAATGGTG AAATCATCGA GCGTGGCACG
CACCGCGAAT TGGTTGAACG CGGCGGACGG TACGCCGATA TGTACCGTCG CGAGTTGCTG
CGCGCCGAGT TGGAGGAAGA GTAG
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| Protein sequence | MDQFHRLWPF VRRYRRRLLI GALCAMAATA VAAMIPQIVR FAVDDLNTRG VVIERLLQYG
GLLLLAALVE GLLRYGQRTQ IIGTSHLIDF DMREALFARL LTLDQGFFTT MHTGDLMTRV
TNDLSAVRMF LGPGISNLLG STLLLLTAAT LMFLTNPALA AIVVLLLPMA AVLFVVIGGR
MRAIFRKVQD QFGEISTRAQ ENFSGIRTIK AYAQEDAEIR VFRQANERYR ALNLRYVLLS
GMLWPIIGLM LGTIGAFVLL IGGRMVAAGE MTVGELVLFN AYLAQLAWPV IALGWTVDLY
QQGAASLVRI GEVLQRRSAI ASPPDAPRDF VVRGEVEFRN VGLRFAHSQH TNGNASGHHA
NAPSTSGKPA ASGAPEWVLR HISFRIPQGG SLGIVGATGA GKTTLVNLLA RVRDPDEGQV
LVDGYDVRTL PLDALRRGIG YVPQDTFLFS VPIRENVTFG RPDATEDQII HALAVSRLIN
DVEQFPDGID TLIGERGVTL SGGQKQRTAI ARAILRDPAI LILDDALSSV DTHTAAEILA
SLRAMMKGRT SMIIAQRIAT VKDADQIIVL HNGEIIERGT HRELVERGGR YADMYRRELL
RAELEEE
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