Gene Rcas_1243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1243 
Symbol 
ID5538712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1606274 
End bp1606675 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content61% 
IMG OID640893378 
Productglobin 
Protein accessionYP_001431358 
Protein GI156741229 
COG category[R] General function prediction only 
COG ID[COG2346] Truncated hemoglobins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCG AACAATCAAT CTACGAACGC GCCGGTGGCG ATGAACCATT CCGCCGTCTG 
GTCGATGCCT TCTATGCCCG CATCGAGCGC GATCCCCTGC TGCGCCCGAT GTTCCCGGCA
GATCTGGAAC CGGGCAAACT CCATCAGTTT CTGTTCATCA CACAATACTT TGGCGGACCT
CCACGCTATA CGGCGATGCG TGGGCATCCG CGACTGCGGG CGCGCCATCT GCCCTTCGTG
ATCGGACAGG CAGAACGCGA TGCGTGGGTC GCCCACATGC GCGCCGCCAT TGACGAGGCG
GGCTTTCCAG AGGATGTGCG CCCTGCACTG ATCCAGTACT TCGAGCGTAC TGCCACCTTC
ATGATCAACG CCGATCCTGA GCGCCTCAAC CTGCGCGGTT GA
 
Protein sequence
MNTEQSIYER AGGDEPFRRL VDAFYARIER DPLLRPMFPA DLEPGKLHQF LFITQYFGGP 
PRYTAMRGHP RLRARHLPFV IGQAERDAWV AHMRAAIDEA GFPEDVRPAL IQYFERTATF
MINADPERLN LRG