| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1241 |
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| Symbol | |
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| ID | 5538710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1603981 |
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| End bp | 1605345 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640893376 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_001431356 |
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| Protein GI | 156741227 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0538] Isocitrate dehydrogenases |
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| TIGRFAM ID | [TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCGA CGCGCAACCG TGCGCCCGAG GGAGATCCGA TTTCGATCCA GAACGGGCGC
CTTCATGTGC CAGATATGCC CATTATTCCT TATGTCGAAG GCGATGGCAC CGGTCCCGAT
ATCTGGCGGG CAAGTGTGCG CGTCTTCGAT GCCGCCGTCG AACGGGCGTA TGGCGGTCGG
CGCAAATTGA TGTGGTACGA AGTGCTGGCG GGTGAGAAAG CATTCAACCT GACAGGCAGC
TGGTTGCCGG ACGAAACGGT GGAAGCGTTC AAGCACTACC TGGTCGGCAT TAAGGGTCCG
TTGACAACGC CGGTGGGCAA AGGAATTCGG AGCCTGAACG TCGCGCTGCG TCAGTTGCTC
GATCTCTATG TCTGTTTGCG CCCGGTGCGC TATTTTCAAG GGGTTCCGTC GCCGGTGAAG
CGCCCCGAAT TAGTCGATAT GGTCATCTTC CGTGAGAATA CGGAAGACAT CTATGCCGGC
ATCGAGTATG CCGCCGGCAC TCCCGAAGCG CAGTGCGTGC TCGACTTCCT TCGCACGACC
TTTCCGAAAG ACTTCGAGAA AATTCGCTTT GGTACGGGTG ATAAAGTGCG CGAGTTTCTC
GCCATGCTAG GGGATGGCGG GGATGAAGGC GCGGTTGAAG TTGGCATCGG CATCAAACCG
GTCAGTCGGT TGGGAACAGA GCGCCTGGTG GCTGCCGCCA TTCAGTATGC CATCACCCAT
CGGCGCAGAA GTGTCACTTT TGTGCATAAA GGCAACATTA TGAAGTTCAC TGAAGGAGCG
TTCCGCGATT GGGGATACGC GCTGGCAGAA CGCGCCTTTG GTGAACACGT CTATACCTGG
GCGCAATGGG AGCGCACCAA AGCCGAAAAG GGCGAGGCGG CGGCGAACGC CGAGCAGCGC
GAGGCGCTGG CTGCCGGTGC GATTCTCATC AAGGACGCGA TTGCCGACAT CACGCTCCAG
CAAGTGCTGA CGCGACCGGA GGAGTTCGAT GTGATTGCGA CCCTTAATCT CAACGGCGAC
TACCTGAGCG ATGCGCTGGC GGCGCAGGTA GGCGGCATCG GGATCGCGCC GGGGGGGAAT
ATCAACTACA TCACCGGTCA CGCAATCTTT GAAGCGACCC ACGGTACGGC GCCGAAGTAC
GCCAATCTGG ATCGCGTCAA TCCGGGCAGC GTTATCCTGA GCGGCGATAT GATGCTCCGC
TATCTGGGGT GGACCGAAGC GGCAGACCTG ATCATTCGCG CGCTCGAGAA GACGATTGCG
CAGAAAATCG TTACCTACGA CTTTGCGCGC CTGATGACCG GCGCGAAAGA AGTCAAGACG
TCGCAATTCG CTGATGCTAT GATCGCCAAT ATGGATGGCG AGTAG
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| Protein sequence | MTATRNRAPE GDPISIQNGR LHVPDMPIIP YVEGDGTGPD IWRASVRVFD AAVERAYGGR
RKLMWYEVLA GEKAFNLTGS WLPDETVEAF KHYLVGIKGP LTTPVGKGIR SLNVALRQLL
DLYVCLRPVR YFQGVPSPVK RPELVDMVIF RENTEDIYAG IEYAAGTPEA QCVLDFLRTT
FPKDFEKIRF GTGDKVREFL AMLGDGGDEG AVEVGIGIKP VSRLGTERLV AAAIQYAITH
RRRSVTFVHK GNIMKFTEGA FRDWGYALAE RAFGEHVYTW AQWERTKAEK GEAAANAEQR
EALAAGAILI KDAIADITLQ QVLTRPEEFD VIATLNLNGD YLSDALAAQV GGIGIAPGGN
INYITGHAIF EATHGTAPKY ANLDRVNPGS VILSGDMMLR YLGWTEAADL IIRALEKTIA
QKIVTYDFAR LMTGAKEVKT SQFADAMIAN MDGE
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