| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1239 |
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| Symbol | |
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| ID | 5538708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1600628 |
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| End bp | 1601572 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640893374 |
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| Product | anti-sigma-factor antagonist |
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| Protein accession | YP_001431354 |
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| Protein GI | 156741225 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.974707 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGATTA CACAACGACA GGTTACGATA GGGGCGCTGG CGATTGTCAC AGGGGGAAAC
ATTCTGTTCT CCATCCTTCT CGGACTGAAC CAGGGCGTAA GCGGGGCTAC GGTTCCCGGC
ATATCAGCGA TCATCGATCT GGTCCTTCTG ATGGCCTATC TTCGCGGGTG GTCGCACGCG
CCGAATGTCT TGATCGTCAT TGTATCGGTG ACGGCTGCCT TTGCCCTGAA TACTCTTCCC
AGGGATGGCG TGGTCGGCAT CCCGATGGCA TTGCTCTTTC CGGCAGCGCT GGCGCTGGCG
ATGACTACCC CGCCGTGGCT GATTGCAGGC GCGACTCTGA CCGCCGCGAT CTATATTGCG
CGCGTGTTCA CAAGCGGCTT TGCGCTCAAT GTGGTCGAAT TCATTGTCTA CGTCATGCTG
GTCGGCATTC TGCTGTTGGC GCGCGCGGTG CTCAACGCCA CTGCGCAGCA GGCGGACGAA
GCGCGCAGGC GCGCAGAGCA GGCGCAGGCG CGGACGGAGG AGCAAGCGCG CGCGCTCGAA
GCCGCCAATG CCGCGCAACA GGCGCAACTC GACGAGCAAC GCCGCCTGCT CGACCTGGTC
GCTACCCTCG AAACCCCGGC AATCACCCTC GCCAACGGCG TTCTGTTCGC GCCAATCGTC
GGGCATCTGG ACAGCCGCCG CTCGGCGCGG TTCACTGCGC GCCTGCTCAA AGTGGCGCAC
GATCAGCGCG CGCATCACGT CATTATCGAC ATTTCCGGCG TCTCGACGGT GGACACGGCG
GTAGCACAGG CATTGATCAG CGCAGCACAG GCGCTCAAAT TGCTCGGCTG TCGCGTGACG
TTAAGCGGTA TCTCATCGGA AGTGGCGCTG ACACTGACGC AGCAGAACGT ATCGTTGCGC
GACATCGCCA CTGCGCGTAG CCCGCAGGAA GCGCTCACGA TGTAA
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| Protein sequence | MMITQRQVTI GALAIVTGGN ILFSILLGLN QGVSGATVPG ISAIIDLVLL MAYLRGWSHA
PNVLIVIVSV TAAFALNTLP RDGVVGIPMA LLFPAALALA MTTPPWLIAG ATLTAAIYIA
RVFTSGFALN VVEFIVYVML VGILLLARAV LNATAQQADE ARRRAEQAQA RTEEQARALE
AANAAQQAQL DEQRRLLDLV ATLETPAITL ANGVLFAPIV GHLDSRRSAR FTARLLKVAH
DQRAHHVIID ISGVSTVDTA VAQALISAAQ ALKLLGCRVT LSGISSEVAL TLTQQNVSLR
DIATARSPQE ALTM
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