| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1232 |
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| Symbol | |
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| ID | 5538701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1591698 |
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| End bp | 1592765 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640893367 |
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| Product | ABC transporter related |
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| Protein accession | YP_001431347 |
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| Protein GI | 156741218 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.859211 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCAT CAAACAGCGC CATCGAATTA CGGTCGGTCA GCAAGTGGTT TCAGCGCAAC
ACCCCTGCGG TTCATCAGGT GTCGTTGCAG GCGCCGCGTG GAGCGCTCCT CGCGCTGCTC
GGACCAAGCG GCTGCGGGAA GACCACCACG CTCCGCCTGA TCGCCGGTCT CGAAATACCC
GATACCGGGG AAATCTATCT GGCAGGCGCG CGCGTCGCCG GCGGCGGCGA TTGGACGCCG
CCAGAGCAAC GGCGGGTAGG GATGGTCTTT CAGGATTATG CGCTCTTTCC CCACCTGACG
GTGCGCGAGA ATGTGGCGTT TGGTCTCAAC GGACGTTCCA CGCGAGAGCG CGCAGCGCGC
GTCGGTGATC TGCTGGCGCT AACCGGGCTT GCCGACCTGG CGGATCGGTA CCCACATCAA
CTGTCGGGCG GGCAACAACA GCGCGTGGCG CTGGCACGCG CCCTGGCGCC CGATCCACAG
GTTATCCTGC TCGATGAGCC ATTCTCGAAC CTCGATGCCG TACTGCGCAA GGCGACACGC
GAAGAAGTGC GGCGCATTCT GCGGCAATCG GGCGCCACTG CGGTGTTCGT CACCCACGAT
CAGGAAGAAG CGTTCAGCAT CGCCGATATT GTCGTGGTCA TGCGCAATGG CGCTATCGAG
CAGATCGGCG CGCCTCACGA GATCTATCTG CGCCCGTCGA CACGCACCGT CGCCACATTC
GTCGGCGAGG CGAACTTCGT TCCGGCGCGC GCCTCTGGAC GTTGCGCTGA GTGCGTGCTC
GGCAGCGTGC CGCTTGCTGC GCCGCGCAAT GGACCGGTCG AAGTGATGGT GCGCCCCGAG
GCGCTCGACC TCTGCCCGGA CGCTGCCGGT TGCGGGCTGA TCGAAGAGAT TGTCTTCTTC
GGGCACGACC AGTTGATCGG CATTCGCATG TGCGATGGCA CGCTCATCCA GGCACGCACC
GGTCCCAGGA TCGACATCAC CCCCGGCGCG CGAGTCGCCG TCCGGGTGCA GGGTGAGGCG
GTCGCGTTTC CGTATGATGA GAACCGAGAA CCGAGAACCA AGAACTGA
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| Protein sequence | MSASNSAIEL RSVSKWFQRN TPAVHQVSLQ APRGALLALL GPSGCGKTTT LRLIAGLEIP
DTGEIYLAGA RVAGGGDWTP PEQRRVGMVF QDYALFPHLT VRENVAFGLN GRSTRERAAR
VGDLLALTGL ADLADRYPHQ LSGGQQQRVA LARALAPDPQ VILLDEPFSN LDAVLRKATR
EEVRRILRQS GATAVFVTHD QEEAFSIADI VVVMRNGAIE QIGAPHEIYL RPSTRTVATF
VGEANFVPAR ASGRCAECVL GSVPLAAPRN GPVEVMVRPE ALDLCPDAAG CGLIEEIVFF
GHDQLIGIRM CDGTLIQART GPRIDITPGA RVAVRVQGEA VAFPYDENRE PRTKN
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