| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1229 |
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| Symbol | |
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| ID | 5538698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1587892 |
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| End bp | 1588788 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640893364 |
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| Product | peptidase S1 and S6 chymotrypsin/Hap |
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| Protein accession | YP_001431344 |
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| Protein GI | 156741215 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0581563 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGATGC ATGGGTTTTA TCATACTTCT GGCATCGCTG CCGGCTTTGC CGATCTTGCC
GAACGCTCTC GGCGGAGCGT CGTGCATCTG CTCAGCGCAG GCAGGGGCAG CGGAACAGGC
GTGGTCTGGC AAATTGGCGG CGTTGTCCTC ACCAACGATC ACGTGGTTGC CGGAGCAGGC
GGTATGCTGC GCGCGCAAAC ACTCGACGGG CGCGACCTGC CGGCGACGGT GATGGCACGC
AGCCAGGACC TCGATCTGGC GTTGTTGCGC ATTCCAGTCG ATGATCTCTT GCCTATCACG
GTCGGCGACT CGACGCGACT GCGGGTTGGT GAACTCGTCT TCGCAATTGG GCATCCATGG
GGGCAACCGT GGGTCGTGAC CGCCGGCATC GTCAGCGGGT TGGGCGAAGC GGAGGCACGC
AACGGTCAGC CGATAGCCTT CATCCGTTCC GACGTGCGGC TGGCGCCGGG CAACTCGGGG
GGACCACTCC TCGATGCGCA CGGTCAGGTC ATTGGGATCA ACGCGATGGT TTTCGGCGGC
GATCTCTCGG TAGCGATTGC CAGCCACGTC GTCGAGTCAT GGCTCAACGG CGCGCAGGGA
CGGCGGGTGC GCCTCGGCGT CGGGGTGCAG CCATCGCCGC TACCGACGGG ATTGTTGAAC
GGGCGTGCGC ATGGGCTGTT AGTCATCAGT ATCGAGCCTG GCAGTCCAGC AGAACAGGCA
GGGTTGATGG TCGGCGACTT GCTGCTCCAC GCCGATGCGG TATCACTGGA GCGTCCGGAA
GACCTGCACG CGGCGCTCCG GCGCACAGCG GAAGCAACAG TACGCCTCCG CCTGCTGCGC
GCCGGCGCTA TCCGTGTCAT CGACGCGCCC CTGGACAGGG CAGTACAGGA ACCATGA
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| Protein sequence | MMMHGFYHTS GIAAGFADLA ERSRRSVVHL LSAGRGSGTG VVWQIGGVVL TNDHVVAGAG
GMLRAQTLDG RDLPATVMAR SQDLDLALLR IPVDDLLPIT VGDSTRLRVG ELVFAIGHPW
GQPWVVTAGI VSGLGEAEAR NGQPIAFIRS DVRLAPGNSG GPLLDAHGQV IGINAMVFGG
DLSVAIASHV VESWLNGAQG RRVRLGVGVQ PSPLPTGLLN GRAHGLLVIS IEPGSPAEQA
GLMVGDLLLH ADAVSLERPE DLHAALRRTA EATVRLRLLR AGAIRVIDAP LDRAVQEP
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