| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1226 |
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| Symbol | |
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| ID | 5538693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1584336 |
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| End bp | 1586153 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640893359 |
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| Product | 5'-nucleotidase domain-containing protein |
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| Protein accession | YP_001431341 |
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| Protein GI | 156741212 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
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| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCATGC CCACGATCTC GCGGCGCACG TTTGTGAAGA CGATGGCGGT TGGATCGGGA
ACAATCGCCT ACCTGGCGAC GGCGCTGACG GTGCACGGCG CCGGTCCAGA GGTCTACACG
CTGCGCATTG TCCACACGAA CGATCATCAC GCACGCATCG AGCCGGTGTT CAGTGGCGCC
AACCCCGTCC ATGGCGGCGT TTCGCGGCGT AAGACGCTGA TCGATGCCAT TCGAAACGAA
GGCGGCAATC AGTTGCTACT CGACGCTGGC GATGTGTTTC AGGGCACGCT CTACTTCAAC
CAGTACCGCG GGCTGGCAGA CCTTGAGTTC TACAATGCAC TCAAGTACGA TGCCATGGCG
ATTGGCAACC ACGAGTTCGA CATCGGGCAG GCGCCGCTGG CGGATTTTGC GCGCGGCGCA
ACTTTCCCGC TGCTCAGCGC CAATATTCAG GTCGATCGCT CGTCGCCGCT CTTTGGTCTC
ATTAAGCCGT GGGTCGTCGT CTGGGTCGGT GGTCAACCCA TCGGTATCAT TGGCGTGACC
ACCGAAGACA CGCCGGTGCT CAGCAATTCC GGTCCTGGCG TCAGGTTCAC CAACTATATC
GATGCAGTGC GCCTGGGGGT TGAGTCGCTG CGCCGCGATG GAGTCAACAA GATCATTGCG
CTGACCCACG TCGGCATTCA GGCAGACCGT GAACTGGCGC GGCGTGTCGA TGGTTTGTCG
GTCATCATTG GCGGGCACAG CCACACGCCG ATGGGTCCGA TGGTCAATCC GCAATCACCT
GATCGACCCT ACCCCGAAGT CATTGCCTCA CCCTCGCGCA AGCCGGTGAT CGTGGCGCAC
GATTGGGAGT GGGGGCGCTG GCTTGGCGAC CTGACGATTG GCTTCGACGC CAACGGCGAC
ATTACGCGCG TGGTTGCAGG GCGCCCCACC GAAGTGTTGC CCGCGATCAA TCCTGATGGC
GGTTTCGAGA ACCGGATCAG AACCTTCAAA GGTCCTCTGG ATCAACTGCG CGCGACACCA
GTTGGCGAAG CGCGCGTGGC GCTCAATGGC GCTCGCGCCG ATGTCCGCTC GAAGGAAACC
AACCTGGGGA ACCTGATCGC CGATTCGATG CTGGCGAAGA CGGCGCCGGC CGGCGCGCAG
TTGGCCATTA TGAACGGCGG TGGTATCCGC ACCAGCATAC CTGAAGGACG CATCACCCTT
GGTCAGGTGC TCGAAGTCAT GCCATTCGGC AACACCCTTG TGCTGCTGAC CCTTACCGGC
GATCAGGTCA AGGCAGCGCT GGAGAATGGC GTCAGTCAGG TGGAACAGTC CGCCGGGCGC
TTTCCGCAGG TCAGCGGTAT GCGTTATAGT TGGAACGCTT CGGCGCCAGC CGGGAGCCGC
ATTACCGGCA TTCAGGTCTC TGATGGAAGA GGCGGGTTTG TGGCTATCAA TCCGAACGCG
ACATACCGCG TGGTCGTCAA CAACTTTATC GCTGGCGGCG GAGACGGCTA CAGTGTGTTG
CAGCAGGGAA CGAACAGGGT GGACACCGGC TTTCTCGATG CCGATGTGCT GGTGGAATAC
CTCCAGGCGC GTTCGCCCGT CAGTCCGCAG GTCGAAGGGC GCATCGTGCA GAATGGCACG
CTGCCAGGCG CAGCCGCGTC AGCCCCGGCG CCAGCCGAAA TGCCGGTGGC GTTGCCGCGC
ACCGGCGGCG AGTCGTTGCC CGCGTGGTTG CTGGCTCTGG CGGCAGCCGG AGCGATTGGC
GGCGGTCTAC GGCTGCGTGA GCGCGCTGCG CGCATGGCAA CCGCCGATGA ACACGAACCC
GTCACCGTCA ACCAGTAG
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| Protein sequence | MSMPTISRRT FVKTMAVGSG TIAYLATALT VHGAGPEVYT LRIVHTNDHH ARIEPVFSGA
NPVHGGVSRR KTLIDAIRNE GGNQLLLDAG DVFQGTLYFN QYRGLADLEF YNALKYDAMA
IGNHEFDIGQ APLADFARGA TFPLLSANIQ VDRSSPLFGL IKPWVVVWVG GQPIGIIGVT
TEDTPVLSNS GPGVRFTNYI DAVRLGVESL RRDGVNKIIA LTHVGIQADR ELARRVDGLS
VIIGGHSHTP MGPMVNPQSP DRPYPEVIAS PSRKPVIVAH DWEWGRWLGD LTIGFDANGD
ITRVVAGRPT EVLPAINPDG GFENRIRTFK GPLDQLRATP VGEARVALNG ARADVRSKET
NLGNLIADSM LAKTAPAGAQ LAIMNGGGIR TSIPEGRITL GQVLEVMPFG NTLVLLTLTG
DQVKAALENG VSQVEQSAGR FPQVSGMRYS WNASAPAGSR ITGIQVSDGR GGFVAINPNA
TYRVVVNNFI AGGGDGYSVL QQGTNRVDTG FLDADVLVEY LQARSPVSPQ VEGRIVQNGT
LPGAAASAPA PAEMPVALPR TGGESLPAWL LALAAAGAIG GGLRLRERAA RMATADEHEP
VTVNQ
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