| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1216 |
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| Symbol | |
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| ID | 5538682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1571309 |
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| End bp | 1572022 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640893348 |
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| Product | glycerophosphodiester phosphodiesterase |
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| Protein accession | YP_001431331 |
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| Protein GI | 156741202 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.112264 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTGG TGATCGCACA TCGCGGCGCA TCGGCGTATG CGCCGGAAAA TACCATGCGC
GCCTTCGAAC TCGCCGCCCG GCAGGGCGCC GATATGTGTG AACTCGATGT CCAACGCACC
GCCGATGGCG GACTGGTCGT GTTTCACGAT GATACCACCG CGCGATGGGA GACGAAAGGA
CGACCCGTGA CGCATTGCAC CCTCGCCGAT CTGCAACAGA TCGACATAGG CGGCGAGCGA
GTGGCGACCC TTGCAGAGGT ATGCGTCTTT GCTCGCGAAC GCGGGATGCA GCTGAACGTC
GAATTGAAGG CGCGCGGTAT CGGCGCCGAT GTGGTGCGCC TGTTGCGCAA TGAACAGGTG
ATCGATCAAA CACTGATATC TTCGTTCTGG GACGAAGCGC TGGCAGAGAT CGCGGCAATC
GATCCCGATC TGCCGCGCGC CCTCCTGATG GGTATCCCGA CATTTCGCCC CGATGTGCGT
CTGCGCGAAA GCTGGCCCTT CCTGGAACTC AAGCGGATTG GCGCAGTCGC CTGGCATCCC
GCCTGTCAGA TACCGTTGCT CGACCACGTT CTGCCGATCG TGCGCCGCGC CGGGTATCGT
GTCCATGTCT GGACGGTCAA TGACCCCGAT GAGATGCGGC GCTTCCTGAG GGTGGGCGTC
GATGGCATCA TTACCGATAC TCCCGATGTC CTGCGACGGA TCGTTGCCGA ATAA
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| Protein sequence | MTLVIAHRGA SAYAPENTMR AFELAARQGA DMCELDVQRT ADGGLVVFHD DTTARWETKG
RPVTHCTLAD LQQIDIGGER VATLAEVCVF ARERGMQLNV ELKARGIGAD VVRLLRNEQV
IDQTLISSFW DEALAEIAAI DPDLPRALLM GIPTFRPDVR LRESWPFLEL KRIGAVAWHP
ACQIPLLDHV LPIVRRAGYR VHVWTVNDPD EMRRFLRVGV DGIITDTPDV LRRIVAE
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