Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1211 |
Symbol | |
ID | 5538677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 1564948 |
End bp | 1566579 |
Gene Length | 1632 bp |
Protein Length | 543 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640893343 |
Product | chaperonin GroEL |
Protein accession | YP_001431326 |
Protein GI | 156741197 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
TIGRFAM ID | [TIGR02348] chaperonin GroL |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCAAAGC AGTTGTATTT CAACGAAGAG GCGCGCCGCG CGCTCAAGCG TGGCGTCGAT ATTGTCGCCG ATGCCGTCAA GACGACGCTC GGACCGCGCG GGCGCAATGT GTCGATTGAC AAGAAGTTTG GCGCGCCGAC CGTGACCCAC GACGGTGTAA CCGTCGCCAA AGAGATCGAA CTGAAGGACC CCTTCGAGAA TATGGGCGCG CGCCTGCTGG TTGAAGTCGC TACCAAGACG AACGATGTCG TCGGTGACGG TACGACGACG GCGACGGTTC TGGCGCAGTC GATTGTCAAT GAAGGCTTGA AGATGGTCGC CGCCGGCGCC AACCCCATGC TGATCAAGCG CGGACTCGAC AAGGCGGTCG AGGCGGTGGT TGCGGAGTTG AAGAGCGTCG CCATTCCGGT GCGCGACCGC GCCGACATTG CACACGTTGC GGCTATTTCT GCCGCCGATA GCGAGATCGG CGATCTGATC GCCGAGGTGA TGGAGAAAGT CGGCAAGGAC GGCGTGATCA CCGTCGAGGA GAGCAAGGGC ATTGCTTTCG AGAAGGAATA CACCGAAGGC ATGCAGATCG ACCGCGGCTA CATTTCGCCC TACTTCGTCA CCAACCCGGA GCGAATGGAA GCCGAACTCG AAGACCCCTA CATCCTGATC ACCGACAAGA AGATCAGCAG CATCCAGGAC ATCCTGCCGG TGCTCGAGAA GGCATTGCAG GTCACCAAGA ACCTGGTCAT TGTCGCCGAG GATGTTGATG GTGAGGCGCT GGCGACGCTG GTGGTCAACA AACTGCGCGG CACGATCAAC GCGCTGGCGG TCAAGGCGCC TGGTTTCGGC GATCGGCGCA AGGCGATGCT TCAGGACATC GCCATTCTGA CCGGCGGTAC GCTCATCAGC GAAGAGATTG GCCGCAAACT CGACAGCGCC ACAATCGAGG ACCTTGGCCG CGCGCGCCGC GTCGTGTCGG ACAAGGATAA CACGACGTTT ATCGAAGGGC GCGGCGATGA GCGCGCCATT CGCGCGCGCA TCGAGCAGAT CCGTGCGCAG ATCGAGACGA CGACCAGCGA CTTCGACCGT GAGAAGTTGC AGGAGCGGCT GGCGAAGCTG GCGGGTGGCG TGGCCGTGCT CAAGGTTGGC GCGGCGACTG AGCCGGAGCT GAAGGAGAAG AAGCATCGCG TCGAGGACGC GCTCTCAACG GCGCGTTCGG CAGTCGAAGA AGGCATTGTA CCCGGCGGCG GCGTGGCGTT GCTCACCGCA ATTCCGGCGC TTGATCGGGT GCAGGTGACG TATGAGGACG AGAAGTACGG CGTGCAGATC CTGCGCCGCG CACTCGAGGA GCCGATGCGT CAGCTGGCAC GCAATGCCGG TGAGGACGGC GCGGTGATTA TCGATACGGT GCGCCGCCTC CAGAAGGAGA AGAATGATAA GAATATCGGC TACAATGTAT TGACCGGCGA ATTCGGCAAT ATGATCGAGA TGGGTATCAT CGACCCGGTG AAGGTGACCC GCTCGGCAGT GCAGAACGCC GTGTCGATTG CCGGTCTGTT GCTGACGACC GAGGCGCTGA TTGCCGATAT TCCAGAGGAG AAACCGGCAG CGCCGACTCC GGGCGGCGGG ATGGACTTCT AA
|
Protein sequence | MPKQLYFNEE ARRALKRGVD IVADAVKTTL GPRGRNVSID KKFGAPTVTH DGVTVAKEIE LKDPFENMGA RLLVEVATKT NDVVGDGTTT ATVLAQSIVN EGLKMVAAGA NPMLIKRGLD KAVEAVVAEL KSVAIPVRDR ADIAHVAAIS AADSEIGDLI AEVMEKVGKD GVITVEESKG IAFEKEYTEG MQIDRGYISP YFVTNPERME AELEDPYILI TDKKISSIQD ILPVLEKALQ VTKNLVIVAE DVDGEALATL VVNKLRGTIN ALAVKAPGFG DRRKAMLQDI AILTGGTLIS EEIGRKLDSA TIEDLGRARR VVSDKDNTTF IEGRGDERAI RARIEQIRAQ IETTTSDFDR EKLQERLAKL AGGVAVLKVG AATEPELKEK KHRVEDALST ARSAVEEGIV PGGGVALLTA IPALDRVQVT YEDEKYGVQI LRRALEEPMR QLARNAGEDG AVIIDTVRRL QKEKNDKNIG YNVLTGEFGN MIEMGIIDPV KVTRSAVQNA VSIAGLLLTT EALIADIPEE KPAAPTPGGG MDF
|
| |