| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1209 |
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| Symbol | |
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| ID | 5538675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1562359 |
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| End bp | 1563546 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640893341 |
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| Product | aminotransferase class I and II |
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| Protein accession | YP_001431324 |
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| Protein GI | 156741195 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGGCA GGCTTGCCCG CCGTGTGGCA GGGTTTGGCA CGACGATCTT CACCGAGATG
AGCGCGCTGG CGCTGGAGCG CGGCGCGATC AATCTGGGGC AGGGATTCCC CGATTTTCCG
GGTCCGTCAT TTGTGAAGGA AGCGGCAACC GCAGCCATTG GCGCCGACAT CAACCAGTAT
GCGCCGATGC CCGGTCTGCC CCGCCTGCGG CAGGCGGTTG CCGCGCAGTG GGAATGCGAC
TATGGCCGCG CAGTGGACTG GCAGCGCGAA GTGACGATCA CCAGCGGCGC GACGGAGGCG
CTCTGCGATG CGATGCTGGC GCTCCTTGAT CCGGGGGATG GAGTCGTCAT CTTTGAGCCG
GCGTATGACG CTTATGTGCC CGATATTACG CTGGCAGGCG GCACGCCGCT GCCGGTGCGC
CTGTATCCGC CCGTCGCCGA TCATACGGCG TGGTGGTTCG ATCCGGTGGA ACTGCACGCC
GCCTTCGCGC GCAAACCGAC GCTCATCATT CTCAACACGC CGCACAACCC GACCGGCAAA
GTCTTTACCC GCACCGAATT GGAACTCATC GCCCATCTTT GTCAGGAGTA CAACACGATC
GCCATTACCG ACGAAGTGTA CGACCGGTTG GTGTTCGACG GCGCGGCGCA TATTCCGCTG
GCGACGCTCC CCGGCATGTG GGAGCGCACC TTGACGCTCA ACAGCGCTGG AAAGACCTTT
AGCGTCACCG GCTGGAAGAT CGGCTACGCG GTCGGACCGG CGCATCTGAA CCATGCACTG
CGTCAGGCGC ATCAGTGGGT GACGTTCGCC ACAGCATCGC CGTTGCAGGA AGCCATCGCC
ACAGCGCTGG AACAGGCGTC GGTCAACGGC TACTACCGCG ACTTGCTGCG CGACTACGGC
GAACGCCGGG CGCGACTGGA ACAGGCGCTC GAAACTGCCG GATTGCCGGT GCTGCCGGTG
GAGGGCGCCT ATTTCATTTC TGCCGACATC AGCGCTACTG GCTGGACCGA CGACCGTGCC
TTCTGTCGCT GGTTGACGAC CGACATTGGC GTTGCGGCGA TCCCGACGTC GGTGTTCTAC
AGCGATCCGG CGAGTGCGCC GTGTTTGGCG CGTTTCTGTT TCGCCAAGCG GCTGGAGACC
ATCGATGCCG CAGCAGAGCG CCTGGCGGCG CTGCGCACTC GTTGGTGA
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| Protein sequence | MSGRLARRVA GFGTTIFTEM SALALERGAI NLGQGFPDFP GPSFVKEAAT AAIGADINQY
APMPGLPRLR QAVAAQWECD YGRAVDWQRE VTITSGATEA LCDAMLALLD PGDGVVIFEP
AYDAYVPDIT LAGGTPLPVR LYPPVADHTA WWFDPVELHA AFARKPTLII LNTPHNPTGK
VFTRTELELI AHLCQEYNTI AITDEVYDRL VFDGAAHIPL ATLPGMWERT LTLNSAGKTF
SVTGWKIGYA VGPAHLNHAL RQAHQWVTFA TASPLQEAIA TALEQASVNG YYRDLLRDYG
ERRARLEQAL ETAGLPVLPV EGAYFISADI SATGWTDDRA FCRWLTTDIG VAAIPTSVFY
SDPASAPCLA RFCFAKRLET IDAAAERLAA LRTRW
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