Gene Rcas_1204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1204 
Symbol 
ID5538670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1557522 
End bp1558484 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content61% 
IMG OID640893336 
Productferrochelatase 
Protein accessionYP_001431319 
Protein GI156741190 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0276] Protoheme ferro-lyase (ferrochelatase) 
TIGRFAM ID[TIGR00109] ferrochelatase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGTTGA CCATGACGCT CAAAGAACCA GAGCAAACCG GCGTGCTGGT CATGGAGTAC 
GGTGAGCCGA CAACGCTTGC CGACGTGGTT CCGTATCTGA CAGCGCATTA TCATGGGTAT
CCGCCGTCGT CAGACGATGT CGCATATATG ATCGAGCGCT GCCAGCGCGT GTGGAGCGGC
ACAAGCGGTG ACTCCGCCGC CAGACGATTG GCGACGGCGC TCGCCGATGA ACTGGCACAG
CGCTATGGTT CACGCTTTCA GGTGGTTCTT GGCGCCCGAC ACTGGCATCC GACGGTCGCA
GATGCGCTTG TCCATCTCGT TCGGGCAGGG TTGAATCACG TCGTGGCGTT GCCGCTCAGT
CCGGTCGCTT CGCAGATGAG TCTGCGCAGT TACCAGGAGA CGCTCGACCG CGCTCAGGAG
AACCTGGAAC GAGCAGTGCG GATGCACCTG ATCCCCGACT GGTCCGACCT GCCGGGGTAT
GTGTCGGCGT TAACGACAAA TGCCGTCATT GCGCTGGAAC ACCTCACGGG ACATGATCGC
CGCAATGTGG CATTGCTCGC CATTGCGCAC AGTGTTGCCG AAAGCGCGCG CAAGCCCGAA
ACAGACTATC AGTGGCGGTT GCGCCGGATG ATGCAGCGAT TGGTCGCCAC GCTTGGCTGC
GCTGCCGGGT ATCTGGCGTA CTACGGCGCC GAGGGACCGG GGCAATGGCT GGGTCCTGAT
ACGCTGACGG CGCTTGAGGA GATCGCCTGC GCTGGCTTCG GGCATGTGCT GGCGGTTCCG
ATCAATACTG TGTACGATAA CGTCGAGGTT TGCTATGAAC TCGACGTTCG TATGGCGGAA
CGAGCAACAG CGCTTGGGCT GAAGTATGCG CGCTCCGCTA TCCCCAATGC CGCCCCTGCG
CTTGTTGCCG ATCTTGCGAC GCTTGTGGCC AACACAGCGA TGGTCTTTGA TACTCCCGAA
TGA
 
Protein sequence
MRLTMTLKEP EQTGVLVMEY GEPTTLADVV PYLTAHYHGY PPSSDDVAYM IERCQRVWSG 
TSGDSAARRL ATALADELAQ RYGSRFQVVL GARHWHPTVA DALVHLVRAG LNHVVALPLS
PVASQMSLRS YQETLDRAQE NLERAVRMHL IPDWSDLPGY VSALTTNAVI ALEHLTGHDR
RNVALLAIAH SVAESARKPE TDYQWRLRRM MQRLVATLGC AAGYLAYYGA EGPGQWLGPD
TLTALEEIAC AGFGHVLAVP INTVYDNVEV CYELDVRMAE RATALGLKYA RSAIPNAAPA
LVADLATLVA NTAMVFDTPE