Gene Rcas_1193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1193 
Symbol 
ID5538659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1538608 
End bp1541028 
Gene Length2421 bp 
Protein Length806 aa 
Translation table11 
GC content61% 
IMG OID640893325 
Productcell divisionFtsK/SpoIIIE 
Protein accessionYP_001431308 
Protein GI156741179 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1674] DNA segregation ATPase FtsK/SpoIIIE and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCG CAAAATCCTC TTCAACCGGG CGCAAATCGA CAGGAACGCG CCGTAAACGG 
TCAGGGGCAG CCTCGACGCC TGCACTGCGA CCGGAGCATC AGCGAGAACT TTTCGCCCTT
GGGCTGATCG CCGTCGCTGC GGTCACCGTC GTCTTCTATG TAACCGGCAC GGCTGGCGTG
ATCGGCTCGT CGTGGGTCGA ACTGACGCGC CGCCTGTTGG GATGGGGCGC GCTGGTGGCG
CCACTGTCGC TCGGGTTGCT TGGAGTAGCG ATTCTTCTTC AGGAACAGTA TGAGGATGTG
CGACTGACCG GTGCAACGGT GCTCGGCACG TTGCTGGTGC TGACAGCGCT TCTCGTGCTG
CTGGAGTTTT CCATCGGCGT GCGCGAGGGG TTCGATACGC GCATCGGCGA AGGCGGCGGC
ATCGTCGGGT ATGCGATCCT GGCGCTCCTC TCACAGGCGA TCGGTCGTCC GGCGGCATTG
GTCATTGCCT GCCTGACCGG GCTTGCGGGC ATTCTCTTGA CCTTCGACAT TACACTTCAC
GAACTCTCTT CCTCGCTCCG CGACAGTTTT GCCCGTTTCT GGGCAACGGT GTGGAACCCT
GGCGTGCGGC GCACTGAAGC GTCCGCCGCC CCTGCATCGC GTGCCGCGCC GACAAAGCCT
GATGCGTCGA CGACCTATGT TCCACCACCT CAAGCCGACG ACGATATTGT GCCGACACCA
ATCGCCGAGC GTCCAACACG CGCCAGTCTG TTCCAGCGTC CCGAAACGCG CACCCGCCGC
ACTGCGGTCT CAACGGCGAC CCCTGCTATC AAGCCAGAAA CTGCGTCTCC ACCGGCGTCT
GGCGCTCCTC CTGGCAACAC CACGCTGCTC ACCAACCTAT TGGCGACGCC GGCCGGCGGC
ACACCGGCGG AAGCGGTACA GAAACCGCTC GAAGGGTTCG AGATGTCACC GGTGCATCGC
GCCTGGCCCC TGCCGTCGCT CGATCTGCTG GAAAGTTATC CGGAGGGGAC GATCACCGAT
GAGGAAAAGC GGCTGCGCTC GCGCCTGATC GAAGAAACGC TGGCGAGTTT CAAGGTCGAA
GCGCAGGTGG TCGGCGTCAA CACCGGTCCT GCGGTGACGC AGTTTGAATT GCAACCTGCT
GTTGGCGTCA AGGTCTCTAA AATCACCACT CTGGAAAGAG ACCTTGCGCT GGCGCTGGCG
GCGACATCCA TCCGCATCGA AGCGCCCATC CCTGGCAAGA ATGTGATCGG CATCGAAATC
CCCAACTCCG CAATTTCAAT CGTTGGCATG CGCGAGGTGA TCGAAAGTGA GGAGTTCGAA
CGCGCGAAAG GACGCCTGAA ATGGCCTCTG GGGAAGGATG TGTCCGGCAC GCCGATTATC
GCTGCGCTTG ACCGCATGCC GCACGCGCTC ATGGCTGGCG CGACCGGCAC CGGTAAAAGC
GCCGGGATCA ATGCACTGGT CTGTTCGCTG CTCCTCAAGC ATACTCCCGA CGAGTTGAAG
TTTATTATGA TCGATCCGAA GATGGTCGAG CTGATCGTCT ACAATCGGAT TCCGCATATG
CTCTCGCCGG TGGTGACCGA ACTCGAGCGA GTGGTGCCGA CGCTGAAGTG GGCAACACGC
GAAATGGAGC GGCGCTACAA GGTCTTCGCG CGCTACGGCT TTCGCAACAT CGAAGGATAC
AAAACCGCTG CGCGCCGTCG CGCCGATCTC GAACCGCTTC CCTACATCGT GCTTATTATC
GACGAACTGG CAGACTTGAT GATGATGGCG CCGGACGAAG TCGAAACGCT GATCTGCCGC
CTGGCGCAGA TGGCGCGCGC CACCGGCATT CATCTGGTGA TTGCCACCCA GCGTCCGTCG
GTCGATGTCG TGACCGGTCT GATCAAGGCG AATTTCCCAA CCCGTATCGC ATTTGCAGTC
ACATCGCAGA CCGACTCGCG CGTTATTCTT GATATGAATG GCGCCGAACA GTTGCTGGGA
CGCGGTGACA TGCTCTATAT GGCCGCTGAT GCCGCGCGCC CGGTCCGTCT TCAGGGCACG
TGGGTCTCTG AGGCGGAAGT CGAGCGTATT GTGCAGTTCT GGCGCGATGC GACGCCGCCG
GACGCTGGCG ATACGAAAGG CAAACCCGGC GATCCGACGG AAAAGGAGAA AACCGGCGAT
CAGAGCGAGA TGCGTCCGCC TGGCGAATTT CTCAGCGCCG CTGAGCAGGA CGAACTGCTG
CCGCAGGCGA TCAAACTGGT TCAGCAGCAT TCTCGCGCCT CGGCATCGTT GCTGCAACGC
CGGCTGCGCA TCGGGTACAG CAAAGCCGCG CAACTGATCG ATCTGCTCGA ACAACATGGA
ATCGTCGGTC CGGCAGAAGA AGGGCGCAGC CGGGAAGTGC TGAAACGTGG AGAAGACAGG
GAGTTGGAGG GTTTGCCATA G
 
Protein sequence
MARAKSSSTG RKSTGTRRKR SGAASTPALR PEHQRELFAL GLIAVAAVTV VFYVTGTAGV 
IGSSWVELTR RLLGWGALVA PLSLGLLGVA ILLQEQYEDV RLTGATVLGT LLVLTALLVL
LEFSIGVREG FDTRIGEGGG IVGYAILALL SQAIGRPAAL VIACLTGLAG ILLTFDITLH
ELSSSLRDSF ARFWATVWNP GVRRTEASAA PASRAAPTKP DASTTYVPPP QADDDIVPTP
IAERPTRASL FQRPETRTRR TAVSTATPAI KPETASPPAS GAPPGNTTLL TNLLATPAGG
TPAEAVQKPL EGFEMSPVHR AWPLPSLDLL ESYPEGTITD EEKRLRSRLI EETLASFKVE
AQVVGVNTGP AVTQFELQPA VGVKVSKITT LERDLALALA ATSIRIEAPI PGKNVIGIEI
PNSAISIVGM REVIESEEFE RAKGRLKWPL GKDVSGTPII AALDRMPHAL MAGATGTGKS
AGINALVCSL LLKHTPDELK FIMIDPKMVE LIVYNRIPHM LSPVVTELER VVPTLKWATR
EMERRYKVFA RYGFRNIEGY KTAARRRADL EPLPYIVLII DELADLMMMA PDEVETLICR
LAQMARATGI HLVIATQRPS VDVVTGLIKA NFPTRIAFAV TSQTDSRVIL DMNGAEQLLG
RGDMLYMAAD AARPVRLQGT WVSEAEVERI VQFWRDATPP DAGDTKGKPG DPTEKEKTGD
QSEMRPPGEF LSAAEQDELL PQAIKLVQQH SRASASLLQR RLRIGYSKAA QLIDLLEQHG
IVGPAEEGRS REVLKRGEDR ELEGLP