Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1192 |
Symbol | |
ID | 5538658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 1536916 |
End bp | 1538418 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640893324 |
Product | Ppx/GppA phosphatase |
Protein accession | YP_001431307 |
Protein GI | 156741178 |
COG category | [F] Nucleotide transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0248] Exopolyphosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGAAAC GCATCGGTAT CATTGATCTG GGATCGAACA CCACTCGCAT GATCGTGATG GGGTACACGC CGCATCACTC ATTCCGTCTC CTGGACGAAG TTCGCGAAAG TGTGCGTTTG GCGGAAGGAA TTGGTCCTGA CGGTCGGTTG ACGCCTTCCG CGATGGACCG GGCGGTGGCG ACAATGCGTC TGTTCCATGC ACTGAGCCAT TCAGAGCAGG TACAGATGAT CGTGCCGGTG GCGACAAGCG CCGTGCGTGA AGCGACCAAT CAGGCGGAGT TCGTCGCGCG GGTCGCCGCA GAAGCTAGCG TGTCGATGCG AGTGCTCACG GCGCGCGAAG AGGCATACTA CGGTTACCTC GGCGTAGTCA ACTCCATTGA TCTACGAGAC GGGTTCACCA TCGACATCGG CGGCGGCAGC ACGCAGGTGT CGATGGTGCG TGGGCGCGGG TTTCTCCGCT GGTACAGCCA GCCCATTGGC GCACTGCGCG CCGCCGAACG TTTTGTTCGA TCTGATCCGA TCAGCAACAA AGATTTCCGC GCCCTCGAAT CTGGCGTCGC TGACTATTTC GCATCGCTCG ACTGGCTGAA CGTCGAGCAG GGTCCGATGC TGGTCGGCAT CGGTGGTACA ATCCGCACGC TTGCCGAGAT CGATCAGAAA TTGCACGGAT ATCCGCTCGA CCGTGTTCAC GGGTATGTTC TTCTGCGCGA GCGGCTGGAA GCGCTGATTA ATCAGTTACG GAGCATGGAT CAGCGGCAGC GTGAGGATGT TCCCGGTCTC AGGCGTGATC GCGCCGATCT TATTCTCCCT GGCGCCGTTA TCCTGGCGCA CCTGATGCGG CGTGGCGGGT TCGAGGCGTT GACGGTCGGC GGTCAGGGGT TGCGTGAGGG CATTTTTTAC GAGCACTTTC TGGTTGGCGA GCAACCGCCG CTCTTCGCCG ATATGCGCGG GTTCAGCGTG CAAAACCTGG CGCGCATCTA CAACTACGAG GCGCTCCACG CCGCCAAGGT GCGCGACCTG GCGCTCTCAA TGTTCGATCA ACTGCGCTCA CTGCACCACT ACGGCGAGTG GGAACGCATG CTGCTCGGCT ATGCAGCAAC ACTCCACGAC ATCGGGCTGG CGGTCAATTA CTACGACCAC CACAAGCATG GCGCGTATCT GGTGTTGAAC AGCGCCCTCC AGGGGTTTAC CCACCGCGAA ATCGCTCTGA TCGCGCTCCT GGTGCAGTTT CATCGCAAGG GTGATGTAGA CGCGGGTCCG TTGCGCGCAA TTCTGCACCC GGACGATGAG CAGCGTGTGC TCCGGCTGGC GGCGCTGTTG CGTATCGCAG AATATCTGGA GCGGCGCAAG TGTCAGGTTG TGCAGGATAT TATGGTTGAG GTTGGCGACC CGGTGCGGAT GGTGGCGCGC ACCATCGGCG ATGCGGCGGT CGAAATCTGG GATGCAAACC GGGCGTCGCG CCTGTTCCGT AAAGCGTATG GGCGCGATGT CGCGATCTGT TGA
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Protein sequence | MQKRIGIIDL GSNTTRMIVM GYTPHHSFRL LDEVRESVRL AEGIGPDGRL TPSAMDRAVA TMRLFHALSH SEQVQMIVPV ATSAVREATN QAEFVARVAA EASVSMRVLT AREEAYYGYL GVVNSIDLRD GFTIDIGGGS TQVSMVRGRG FLRWYSQPIG ALRAAERFVR SDPISNKDFR ALESGVADYF ASLDWLNVEQ GPMLVGIGGT IRTLAEIDQK LHGYPLDRVH GYVLLRERLE ALINQLRSMD QRQREDVPGL RRDRADLILP GAVILAHLMR RGGFEALTVG GQGLREGIFY EHFLVGEQPP LFADMRGFSV QNLARIYNYE ALHAAKVRDL ALSMFDQLRS LHHYGEWERM LLGYAATLHD IGLAVNYYDH HKHGAYLVLN SALQGFTHRE IALIALLVQF HRKGDVDAGP LRAILHPDDE QRVLRLAALL RIAEYLERRK CQVVQDIMVE VGDPVRMVAR TIGDAAVEIW DANRASRLFR KAYGRDVAIC
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