| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1187 |
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| Symbol | |
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| ID | 5538653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1530756 |
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| End bp | 1531937 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640893319 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_001431302 |
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| Protein GI | 156741173 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases
[COG0607] Rhodanese-related sulfurtransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.778544 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGTCG CAGAACCACA AACTCAGACA TCGGCAATGA CAGCCAGCGT CCTCTATGAT
GCGTTATTAC ACAATACGGC GCCATTCATT CTCGACGTGC GCAACCCGCA CGACTTCGCG
CGCTGGCGGA TCGAAGGTCG CGCCGGGTTG ACGATTCAGA ACATTCCGTA TTACGACTTT
ATCGAAGATG AAGAAGGTGC AATTGCTCGC GTTCCCGCCG AGCGCGAGGT TCTGGTCGTG
TGCGCCAAGG AAGGGTCGTC ACAGTACGTT GCCGATCTGC TGCGCGCGCG CGGTATCGAA
GCCAGATATC TGGAAGGCGG TATTCTGAGC TGGGGGTATC TCTACGATAC ACGTGACATT
GTCAGCGCCT CATGGGGGCG AATAATACAG GTTGCGCGTC CGGCGCGCGG TGATGTCAGT
TTCATCGTCA TCAGCGACGG CGTGGCTGCG GTCATCGATC CACTGCGCCA TACGGCGCCC
TATCTGGAAG CCATCGCAAT GCACGGCGCG CGCCTGACGC ATATTTTCGA CACGCACGTG
CACGCCGACC ACATCAGTGG CGGACCGGCG CTCAACCACG AGACCGGCGC GCCGTACTAC
GTCCATCCCT ACGATGCGAT CCACCCGATT GACATGCTGC CGGCAACGAT TGCGTACACG
GCGCTCGATG ACGGGCAGAC GTATCGCGTC GGTCAATTCG AACTGCGGAT AATCTGGTAT
CCAGGGCATA CGTTGGGACA GGTGAACATT CTGGCAATCG CTCCCGACGG CTCACGCTAT
CTATTCACCG GTGATGGCAT TTTCTTGCGC TCGTTCGGAC GACCGGACCT CGGCGGCAAA
GGCGAGGCAT GGACGCCGCT GCTGTACGAG AGCATGGCGC GCCGCTTACC GCCACATCTC
GACGATGCAA CGCTCATCCT TCCATCCCAC TTCTCGACGC TCGATGAAGT GGATGATGTC
GGGCGCGTGA CCGCGCCGTG GGGCGTTGTC CGGCAGACGA ATGCGTCGCT GACGCACCTG
AAGTCCGAGG ACGAGTTCAG GTCGTTTGTC CTTGGCAATC TGCCAGAGTT TCCGCCGCAG
TATGTCGAAA TCAAGCGGGT GAATATCGGT CTGCGCACTC CTTCCGAGGC GGACGCGGAA
GAACTAGAGC TTGGCAAGAA TGTGTGCGCC CTGGCGCAGT GA
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| Protein sequence | MTVAEPQTQT SAMTASVLYD ALLHNTAPFI LDVRNPHDFA RWRIEGRAGL TIQNIPYYDF
IEDEEGAIAR VPAEREVLVV CAKEGSSQYV ADLLRARGIE ARYLEGGILS WGYLYDTRDI
VSASWGRIIQ VARPARGDVS FIVISDGVAA VIDPLRHTAP YLEAIAMHGA RLTHIFDTHV
HADHISGGPA LNHETGAPYY VHPYDAIHPI DMLPATIAYT ALDDGQTYRV GQFELRIIWY
PGHTLGQVNI LAIAPDGSRY LFTGDGIFLR SFGRPDLGGK GEAWTPLLYE SMARRLPPHL
DDATLILPSH FSTLDEVDDV GRVTAPWGVV RQTNASLTHL KSEDEFRSFV LGNLPEFPPQ
YVEIKRVNIG LRTPSEADAE ELELGKNVCA LAQ
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