| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1179 |
|---|
| Symbol | |
|---|
| ID | 5538645 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 1523782 |
|---|
| End bp | 1524777 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640893311 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_001431294 |
|---|
| Protein GI | 156741165 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0731] Fe-S oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.143255 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTGCG TTTTTGGTCC CATTCCGTCG CGACGGCTCG GACGATCGCT CGGTATCGAT
CCTGTGCCGT TGAAAACCTG CAACTGGAAC TGCGTCTACT GCCAGTTGGG ACGAACACGC
CCGCTGACCA ATGAGCGTCG CGTGTATGTG CCGTTGCCTG TGCTGCTGAA CGAGGTCGAT
CAGGCGCTCG CAGCTCGCGC GCCCGGCGAG ATCGATTGGG TGACGATTGT CGGATCGGGT
GAGCCGACAT TGCACAGTGA GATCGGCGAC CTCATCCGCG CTATTAAGGT CCGAACGACG
ATAGCGGTGG CGGTGATTAC CAACGGTGCG CTCCTCTACC TGCCTGATGT GCGGGGCGCA
CTCTGCGCTG CCGATGCTGT TCTGCCAACC TTCTCGGCGG GTTCGGCGGC AGTCTATCGC
GCACTGCACC GTCCGCATCC AGAGACCACG TTCGAGCGTC TGTTAGAGGG ATTGATCGCC
TTCCGCGCCG GTTATCGCGG GAAATTATGG GTCGAGGTCA TGCTGGTGCG CGGCGTCAAC
GACAGCGAGG AGGCGTTGCG CGACATCGCT GCGGCGTTGC AGCGCGTTCA GCCCGACCGG
ATCGACATCA CGCTGCCAGA GCGTCCACCG GCCGAACCCT GGGTCGAACC GCCCGACGCC
GAAGGGTTGA TGCGTGCAAC CGCGATCCTT GGCGCAGCGG CACACATAGT CCATCCGGCG
GAAGGAAGTT TCGACCTGCG CGGGTATGCC TCTCCTGTCG AAGCAATCCT CGCCATCATT
GCGCGTCATC CGATGCGCGT TGAGGAACTG GAGCGTGCAG TGGCTCGTTG GGCGCCGGAT
CAGGTGCGCC AGGCGCTGCA AACTCTCGAG TCAAGCGGCG CCGCACAGGT GATCGAACGC
TACGGCACGC GCTTCTGGTG TGCGGCGGAC GCCTTTTATC CCTCGACCGC CTCCGCACCA
CGAAAGGCGG TGACGACATC CTATGGTTGC CGGTAA
|
|---|
| Protein sequence | MACVFGPIPS RRLGRSLGID PVPLKTCNWN CVYCQLGRTR PLTNERRVYV PLPVLLNEVD
QALAARAPGE IDWVTIVGSG EPTLHSEIGD LIRAIKVRTT IAVAVITNGA LLYLPDVRGA
LCAADAVLPT FSAGSAAVYR ALHRPHPETT FERLLEGLIA FRAGYRGKLW VEVMLVRGVN
DSEEALRDIA AALQRVQPDR IDITLPERPP AEPWVEPPDA EGLMRATAIL GAAAHIVHPA
EGSFDLRGYA SPVEAILAII ARHPMRVEEL ERAVARWAPD QVRQALQTLE SSGAAQVIER
YGTRFWCAAD AFYPSTASAP RKAVTTSYGC R
|
|---|
| |