Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1175 |
Symbol | |
ID | 5538641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 1520706 |
End bp | 1521785 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640893307 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001431290 |
Protein GI | 156741161 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5002] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.169908 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGCTGT GGCGGCAACT TCGCTGGCGT ATCATCGCTG CACAGATGCT CGTTGTGCTG GTTGGCGTTG TGACGCTGAT TGTAACGGCC GACATCGTGG CGGCGCGCAC GGTTGATCCC GCACTGTTGC CCGTTTTTGA AGAAGCGGTG CTCCAGGCGC TGATCGTGGC CGCCCTGGCA TCGGCACTGG TCGGTCTTGG CGCAAGCCTG CTGTTGGTGC GCGAGATTCT GCGTCCGTTG CGCCAGCTGG CGGTCAGCAG TCGCCGGATT GCCAGCGGTC ATTACGATGA ACGGGTAACT GTGCCGTTGA GCGATGAACT GCGCGATGTG GCGCAGAGTT TCAATCAGAT GGCGGAAGCG TTGGCGCAGG TCGAACAGCA ACGCGTGACC CTGATCGGCA ATGTGGCGCA TGAGTTGCGC ACACCGCTTG CCGGTCTCGA AGGGTACCTT GAAGGATTGC TCGATGGCGT GTTGCCGGGC GATCCCGAAA CAATCAGTGC TATGCAGCAC GAAGTGCGGC GTCTACGGCG ACTGGTCGAT GACTTGCAGC ACCTCTCACG GGTCGAGGCG GGTCAGATGC CGCTTCAATC GCAGGTCTTC GATCTCGTGG CGCTGGTGCA GCGTATTGTT GCTCAACTGC GACCACAACT CATCGAGCAG TGCCTGGAGA TAGCCGTCGA AGCGCCCGAC AGAGCAGTGC TGGCATATGC CGATCCGGAT CGAACGGCGC AGGTGCTGGT CAATCTGGTG GGCAACGCCA TTCGCTACAC ACCGGAGGAC GGATGCATCA CGCTCCGGGT GCGCAGCGAG GTGGAACACG TTCAGGTTGC CGTAGAAGAT ACTGGCATCG GCATTCCGGC GGAAGCGCTG CCCTACCTGT TCGAGCGTTT CTACCGCGTC GATCCATCGC GCAGCCGGGC GAGCGGCGGC AGCGGGATCG GGCTGACGAT TGCGCGTCAC CTGGCGCGGG CGATGGGGGG CGAGATCACG GCTACCAGCC CTGGCATTGG TCAGGGAAGC GTCTTTACCC TGACCCTGCC GCGCGGCGAT AATGAAAGGG GCAAGCGCCA TAGTTCGTGA
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Protein sequence | MGLWRQLRWR IIAAQMLVVL VGVVTLIVTA DIVAARTVDP ALLPVFEEAV LQALIVAALA SALVGLGASL LLVREILRPL RQLAVSSRRI ASGHYDERVT VPLSDELRDV AQSFNQMAEA LAQVEQQRVT LIGNVAHELR TPLAGLEGYL EGLLDGVLPG DPETISAMQH EVRRLRRLVD DLQHLSRVEA GQMPLQSQVF DLVALVQRIV AQLRPQLIEQ CLEIAVEAPD RAVLAYADPD RTAQVLVNLV GNAIRYTPED GCITLRVRSE VEHVQVAVED TGIGIPAEAL PYLFERFYRV DPSRSRASGG SGIGLTIARH LARAMGGEIT ATSPGIGQGS VFTLTLPRGD NERGKRHSS
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